statgen/METAL

Issues

• Hi, about the STDERR/EFFECT_PRINT_PERCISION

  #36 opened a year ago by seisland1
  2

• Is there a file size or SNP amount limit when using METAL?

  #21 opened 2 years ago by dzimmerman-amc
  4

• ## ERROR: The command you issued could not be processed ...

  #17 opened 3 years ago by AMCalejandro
  3

• Does the implementation of sample overlap correction in METAL need to be amended?

  #43 opened 2 months ago by freeseek
  0

• Convert coordinates of GRCh38 to 37, but the SNPids keep the same, can I meta it via Metal with other GWAS Summary data ?

  #38 opened 6 months ago by dqq0404
  1

• Heterogeneity analysis fails

  #8 opened 4 years ago by lindabroer-g
  8

• METAL HAS CRASHED, but the issue does not seem to be related to memory access.

  #33 opened 2 months ago by 1667857557
  4

• Fatal error:p-value [0] outside range in ninv()

  #32 opened a year ago by AmandaHWChong
  7

• Incorrect label in error message

  #41 opened 3 months ago by megskelton
  0

• wiki/documentation is down

  #40 opened 4 months ago by acburns
  1

• Sample Overlap N=0

  #34 opened a year ago by koujiaodahan
  1

• ERROR: No 'SNP' column found

  #39 opened 5 months ago by mehrnooshshokouhi
  3

• What does the warning: "Bad alleles for marker '', expecting 'a/c' found 'a/g' mean?

  #23 opened 2 years ago
  3

• METAL can not find column

  #37 opened 7 months ago by solveiglokhammer
  0

• how to return Effect and StdErr in the output file

  #10 opened 4 years ago by mikexjiang
  3

• allele 1 vs. Effect allele in output file

  #35 opened a year ago by PyunJung-Min
  1

• #include <zlib.h> in libsrc/InputFile.h throwing compilation error & possible solution

  #31 opened a year ago by pjawinski
  2

• Complaints over gcf

  #24 opened 2 years ago by jinghuazhao
  5

• ERROR: Meta-analysis in progress - before changing analysis scheme, use CLEAR command

  #30 opened 2 years ago by zsf123525
  0

• Input -log(P) values?

  #28 opened 2 years ago by michaelofrancis
  1

• P VALUE META ANALYSIS, are duplicate markers from multiple studies not accepted?

  #27 opened 2 years ago by ymberzal
  0

• Unexpected effective sample size when using sample overlap option

  #26 opened 2 years ago by jean997
  2

• Applying GENOMICCONTROL to meta-analysis results

  #25 opened 2 years ago by soren-rand
  0

• 'StringArray.h' file not found

  #22 opened 2 years ago by bnwolford
  0

• Allele flipping for all SNPs?

  #19 opened 3 years ago by LindsayMMB
  3

• IS MINWEIGHT necessary?

  #20 opened 3 years ago by isabelleboothman
  0

• Effect column in output

  #18 opened 3 years ago by LindsayMMB
  1

• Allele flipping logic in METAL

  #9 opened 4 years ago by weinstockj
  6

• Unexpected error during processing

  #16 opened 3 years ago by ryshi06
  2

• VERBOSE ON mode not working in v 2020-05-05

  #14 opened 3 years ago by croselli
  1

• How to use OVERLAP ON option?

  #15 opened 3 years ago by Mahantesh-Biradar
  1

• Wrong formula in the manuscript?

  #13 opened 3 years ago by GillianGrayson
  0

• METAL without EFFECT column

  #12 opened 4 years ago by meghatron21
  1

• Sample Overlap equal to 1

  #11 opened 4 years ago by cburik
  3

• "OVERLAP ON" not processed

  #7 opened 5 years ago by giuseppe-fanelli
  1

• how can I work out the allele frequency from the meta-analysis output?

  #6 opened 5 years ago by summike
  1

• Create automatic tests

  #2 opened 6 years ago by dtaliun
  0

• Possible new feature? Keep genomic position in METAL output

  #5 opened 6 years ago by Joannavonberg
  2

• add multivariate normal distribution

  #3 opened 7 years ago by dtaliun
  1

• compilation failed on Mac

  #1 opened 7 years ago by dtaliun
  1