Pinned Repositories
chainfile
A crate for working with genomics chain files.
crankshaft
A Rust-based, headless workflow execution engine supporting local, cloud, and HPC.
fq
Command line utility for manipulating Illumina-generated FASTQ files.
ngs
Command line utility for working with next-generation sequencing files.
omics
sprocket
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
sprocket-action
Run Sprocket WDL document validation as part of a CI/CD pipeline with GitHub Actions.
sprocket-vscode
Visual Studio Code extension for Sprocket (https://github.com/stjude-rust-labs/sprocket).
tes
A crate for working with the Task Execution Service (TES) specification.
wdl
Rust crates for working with Workflow Description Language (WDL) documents.
stjude-rust-labs's Repositories
stjude-rust-labs/fq
Command line utility for manipulating Illumina-generated FASTQ files.
stjude-rust-labs/sprocket
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
stjude-rust-labs/ngs
Command line utility for working with next-generation sequencing files.
stjude-rust-labs/wdl
Rust crates for working with Workflow Description Language (WDL) documents.
stjude-rust-labs/crankshaft
A Rust-based, headless workflow execution engine supporting local, cloud, and HPC.
stjude-rust-labs/chainfile
A crate for working with genomics chain files.
stjude-rust-labs/omics
stjude-rust-labs/sprocket-action
Run Sprocket WDL document validation as part of a CI/CD pipeline with GitHub Actions.
stjude-rust-labs/tes
A crate for working with the Task Execution Service (TES) specification.
stjude-rust-labs/sprocket-vscode
Visual Studio Code extension for Sprocket (https://github.com/stjude-rust-labs/sprocket).
stjude-rust-labs/.github