stjude-rust-labs/fq

Issues

• fq lint output

  #39 opened a month ago by darked89
  2

• glibc for ubuntu2004 ?

  #38 opened 2 months ago by colindaven
  2

• `fq lint` fails on large files

  #36 opened 7 months ago by bounlu
  3

• JSON Metrics output

  #37 opened 7 months ago by apeltzer
  0

• Reference genome support for fastq generation

  #35 opened 8 months ago by drkennetz
  2

• `NamesValidator` issue

  #34 opened 9 months ago by bounlu
  3

• Missing newlines are not caught

  #33 opened a year ago by KuechlerO
  3

• Minor Change in fq lint README

  #32 opened a year ago by SaimMomin12
  1

• commands/filter: Apply filter rule to multiple segments

  #30 opened 2 years ago by zaeleus
  1

• Feature request: Filtering based on reads

  #27 opened 2 years ago by rorynolan
  1

• Docs typo

  #28 opened 2 years ago by rorynolan
  1

• FASTQ to (unaligned) BAM/SAM/CRAM

  #26 opened 2 years ago by Midnighter
  3

• Subsample to a fixed number of reads

  #22 opened 3 years ago by Midnighter
  9

• Subsampling paired, compressed reads seems problematic

  #23 opened 3 years ago by Midnighter
  1

• Install on mac not working with 2021 editioning

  #21 opened 3 years ago by rorynolan
  4

• Version reporting not working

  #20 opened 3 years ago by rorynolan
  5

• generate profiling data

  #6 opened 6 years ago by davisem
  3

• Use string_view instead of char*

  #12 opened 6 years ago by claymcleod
  2

• Implement BloomFilter duplicate read name validator.

  #4 opened 6 years ago by claymcleod
  3

• Avoid nuking the root directory when running `make clean`

  #13 opened 6 years ago by zaeleus
  1

• Enhance Cython performance by removing PyObject marshalling.

  #5 opened 6 years ago by claymcleod
  1

• Add GZIP Support

  #3 opened 6 years ago by claymcleod
  0

• Read name should exclude or ignore "the member of a pair"

  #8 opened 6 years ago by adamdingliang
  3

• Use abc for abstract classes

  #7 opened 6 years ago by adamdingliang
  1

• __exit__ takes 4 arguments

  #9 opened 6 years ago by adamdingliang
  2

• ModuleNotFoundError

  #2 opened 6 years ago by davisem
  4

• ImportError

  #1 opened 6 years ago by davisem
  0