Pinned Repositories
align_section_by_points
appian_qc
Validation for automated QC with APPIAN
brainbuilder
A software package for 3D reconstruction of 2D brain sections
c_solve
curriculum-vitae
Curriculum vitae
deep-mri-qc
This project is trained on private MRI data, where scans are marked QC_PASS or QC_FAIL. Several architectures of neural networks are explored to make automatic predictions for new images.
dzi_test
hacking_hour
A workshop series on Python programming for neuroimaging
hiball_winter_school_2021
minc_keras
minc_keras is a code base that was developped during a hackathon to facillitate the implementation of deep learning models for brain imaging with the Keras package.
tfunck's Repositories
tfunck/minc_keras
minc_keras is a code base that was developped during a hackathon to facillitate the implementation of deep learning models for brain imaging with the Keras package.
tfunck/hacking_hour
A workshop series on Python programming for neuroimaging
tfunck/hiball_winter_school_2021
tfunck/align_section_by_points
tfunck/appian_qc
Validation for automated QC with APPIAN
tfunck/brainbuilder
A software package for 3D reconstruction of 2D brain sections
tfunck/c_solve
tfunck/curriculum-vitae
Curriculum vitae
tfunck/deep-mri-qc
This project is trained on private MRI data, where scans are marked QC_PASS or QC_FAIL. Several architectures of neural networks are explored to make automatic predictions for new images.
tfunck/dzi_test
tfunck/fdg_pet_analysis
tfunck/fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
tfunck/fzj_macaque_receptor_atlas
tfunck/gate
Singularity container for Gate
tfunck/image_flow
Simple object-oriented datastructures for building image processing pipelines
tfunck/macaque_gene_recon
tfunck/minima
Minima is a one-size-fits-all Jekyll theme for writers.
tfunck/mirror_volume
Mirror a 3D volume through the center
tfunck/nemo_processing
tfunck/neuromaps-nhp
A toolbox for comparing brain maps from non-human primates
tfunck/neuromaps-nhp-prep
Preprocess and prepare data for Neuromaps NHP
tfunck/perceiver-pytorch
Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch
tfunck/petco
tfunck/simple_pet_pipeline
A simple pipeline for PET image analysis
tfunck/SurfAlign
Align two brain surfaces together using MSM
tfunck/utils
Utility functions for receptor reconstruction
tfunck/vimux
tfunck/wm_dist