theanega

theanega's Stars

• Tomvl117/cellstitch-cuda

  Accelerated CellStitch for 3D labeling of anisotropic image stacks

  Language:Python10

• mahmoodlab/TITAN

  Multimodal Whole Slide Foundation Model for Pathology

  Language:Jupyter Notebook12413

• owid/owid-grapher

  A platform for creating interactive data visualizations

  Language:TypeScript1.4k229

• owid/notebooks

  Our World In Data jupyter notebooks

  Language:HTML8333

• unexploredtest/neural-networks-and-deep-learning

  Code samples for my book "Neural Networks and Deep Learning"

  Language:Python17473

• mnielsen/neural-networks-and-deep-learning

  Code samples for my book "Neural Networks and Deep Learning"

  Language:Python16.2k6.6k

• karpathy/LLM101n

  LLM101n: Let's build a Storyteller

  30.7k1.7k

• freesurfer/freesurfer

  Neuroimaging analysis and visualization suite

  Language:C++621250

• mahmoodlab/MMP

  Multimodal prototyping for cancer survival prediction - ICML 2024

  Language:Jupyter Notebook637

• mahmoodlab/PANTHER

  Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

  Language:Jupyter Notebook10311

• WuLabMDA/Habitat-Analysis

  Habitat Analysis is a MATLAB code for identifying intratumoral habitats with distinct heterogeneity using radiographics scans.

  Language:MATLAB8

• microsoft/BiomedParse

  BiomedParse: A Foundation Model for Joint Segmentation, Detection, and Recognition of Biomedical Objects Across Nine Modalities

  Language:Jupyter Notebook34531

• radiomicsgroup/liver-SALSA

  SALSA is an automatic tool for liver tumors detection and segmentation

  Language:Python2

• enthought/mayavi

  3D visualization of scientific data in Python

  Language:Python1.3k285

• marcomusy/vedo

  A python module for scientific analysis of 3D data based on VTK and Numpy

  Language:Python2.1k267

• understandable-machine-intelligence-lab/Quantus

  Quantus is an eXplainable AI toolkit for responsible evaluation of neural network explanations

  Language:Jupyter Notebook56875

• VikParuchuri/marker

  Convert PDF to markdown + JSON quickly with high accuracy

  Language:Python18.8k1.1k

• scikit-learn/scikit-learn

  scikit-learn: machine learning in Python

  Language:Python60.6k25.5k

• ding-lab/mushroom

  A computational tool for identification of 3D multi-modal spatial neighborhoods

  Language:Jupyter Notebook8

• labsyspharm/ashlar

  ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration

  Language:Python13243

• Sllambias/yucca

  Language:Python202

• Google-Health/imaging-research

  Language:Jupyter Notebook14929

• ibrahimethemhamamci/CT-CLIP

  Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography

  Language:Python21422

• Wangrui-berry/Cross-attention

  Cross-Attention Guided Loss-Based Deep Dual-Branch Fusion Network for Liver Tumor Classification

  Language:Python91

• Lingkai-Kong/SDE-Net

  Code for paper: SDE-Net: Equipping Deep Neural network with Uncertainty Estimates

  Language:Python11018

• Vaibhavs10/insanely-fast-whisper

  Language:Jupyter Notebook7.9k552

• cxli233/FriendsDontLetFriends

  Friends don't let friends make certain types of data visualization - What are they and why are they bad.

  Language:R6.5k253

• ajinkya-kulkarni/PyTextureAnalysis

  PyTextureAnalysis is a Python package for analyzing the texture of images. It includes functions for calculating local orientation, degree of coherence, and structure tensor of an image. This package is built using NumPy, SciPy and OpenCV.

  Language:Python267

• mahmoodlab/TriPath

  Analysis of 3D pathology samples using weakly supervised AI - Cell

  Language:Python948

• MaggieAppleton/digital-gardeners

  Resources, links, projects, and ideas for gardeners tending their digital notes on the public interwebs

  Language:JavaScript4.1k192