thorellk

Biomedical scientist with great interest in bacteria, both on genomic level and how they interact with their host.

@ctmrbio, University of GothenburgGothenburg, Sweden

Pinned Repositories

BACTpipe
BACTpipe: An assembly and annotation pipeline for bacterial genomics
Language:Groovy20 5 1247
Code-and-Data
Language:R2 2 00
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Language:JavaScript1.2k 35 1.6k605
PIRATE
A toolbox for pangenome analysis and threshold evaluation.
Language:Perl91 9 8529
BACTpipe-1
BACTpipe: An assembly and annotation pipeline for bacterial genomics
Language:Groovy0 0 00
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Language:Python0 1 00
PopGenome
:exclamation: This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses. Homepage: http://popgenome.weebly.com
Language:R0 1 00
Salgae_c-di-GMP_analysis
Minhash/pangenome analysis notebooks and associated files
Language:Jupyter Notebook0 0 00

thorellk/BACTpipe-1
BACTpipe: An assembly and annotation pipeline for bacterial genomics
Language:Groovy0 0 00
thorellk/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Language:Python0 1 00
thorellk/PopGenome
:exclamation: This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses. Homepage: http://popgenome.weebly.com
Language:R0 1 00
thorellk/Salgae_c-di-GMP_analysis
Minhash/pangenome analysis notebooks and associated files
Language:Jupyter Notebook0 0 00