timeresistance1996

Pinned Repositories

METABOLIC
A scalable high-throughput metabolic and biogeochemical functional trait profiler
Language:Perl183 4 18846
kraken2
The second version of the Kraken taxonomic sequence classification system
Language:C++741 28 844275
clinker
Gene cluster comparison figure generator
Language:Python545 15 9271
mapDamage
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
Language:Python43 10 5112
treetime
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
Language:Jupyter Notebook232 17 14457
VSURF
Variable Selection Using Random Forests
Language:R36 4 1210
ARG-global
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk of ARGs from multiple perspectives by using these code.
Language:R0 0 00
get_mgrast_data
Scripts that allow easy retrieval of information from the MG-RAST API
Language:Perl0 0 00
resfinder
Language:Python0 0 00
skinmetagenome
Language:Python0 0 00

timeresistance1996's Repositories

timeresistance1996/ARG-global
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk of ARGs from multiple perspectives by using these code.
Language:R0 0 00
timeresistance1996/get_mgrast_data
Scripts that allow easy retrieval of information from the MG-RAST API
Language:Perl0 0 00
timeresistance1996/resfinder
Language:Python0 0 00
timeresistance1996/skinmetagenome
Language:Python0 0 00
timeresistance1996/EasyMetagenome
Easy Metagenome Pipeline