Pinned Repositories
Dark_and_Camouflaged_genes
ASE_outlier_simulation
Script to model allele specific expression outliers in simulated rnaseq data
bacteria-fingerprints
Using the base percentage fingerprint of the 10-mer decomposition of genomic and plasmid DNA to classify bacteria strains
fermatCycle
Interactive visualization of Fermat's Little theorem and the Fermat Primality Test
Minknow_api_utility_scripts
scripts for additional minknow api functionality
MotifFinderDecisionTree
Parses output to a DecisionTree machine learning algorithm and traverses the tree to find most probable motifs in peptide sequence
pep-seq-pipeline
Automated pipeline to run all pep-seq code on simulated and raw data
quantumSoccer
Soccer game using the basic principles of quantum mechanics and super-positioning
RabinMiller
Simple Non-deterministic Rabin Miller test for Primes <3 <3 <3
SRS_SV_calling
snakemake workflow to call structural variants from short-read whole genome sequencing data
tjense25's Repositories
tjense25/SRS_SV_calling
snakemake workflow to call structural variants from short-read whole genome sequencing data
tjense25/bacteria-fingerprints
Using the base percentage fingerprint of the 10-mer decomposition of genomic and plasmid DNA to classify bacteria strains
tjense25/Minknow_api_utility_scripts
scripts for additional minknow api functionality
tjense25/RabinMiller
Simple Non-deterministic Rabin Miller test for Primes <3 <3 <3
tjense25/ASE_outlier_simulation
Script to model allele specific expression outliers in simulated rnaseq data
tjense25/fermatCycle
Interactive visualization of Fermat's Little theorem and the Fermat Primality Test
tjense25/MotifFinderDecisionTree
Parses output to a DecisionTree machine learning algorithm and traverses the tree to find most probable motifs in peptide sequence
tjense25/pep-seq-pipeline
Automated pipeline to run all pep-seq code on simulated and raw data
tjense25/quantumSoccer
Soccer game using the basic principles of quantum mechanics and super-positioning
tjense25/bio-algorithms
Implementation of commonly used bioinformatics algorithms
tjense25/bioclim
Species distribution modeling in R using a bioclim model
tjense25/build_rnaseq_paper_public
Code for the paper: Impact of genome build on RNA-seq interpretation and diagnostics
tjense25/chat
Chat web application using firebase
tjense25/ClientServerJavaPractice
tjense25/creative-project-1
tjense25/election
tjense25/FatalistChess
A futile random walk through chess space
tjense25/globeTrotter
javascript game
tjense25/HG002_SeqTech_Comparison
Benchmarking Long Read Sequencing Platforms on small variant and SV calling on Genome in a Bottle HG002
tjense25/JuliaGridStabilizer
Hot Plate Stabilization coded in Julia
tjense25/look-alike
Look Alike Photo Generator
tjense25/METAFORA
METhylation Analysis For Outlier Region Annotation
tjense25/pep-seq
Clement Lab research: finding toxic motifs in randomly simulated peptide data
tjense25/pep-seq-genetic-algorithm
tjense25/ProteinClusterer
tjense25/Snakemake_Tutorial
Montgomery Lab snakemake introduction
tjense25/SongSim
tjense25/songSimNode
tjense25/tjense25.github.io
tjense25/TR_outlier_calling
Rscript to calculate mean neighbor distance of TR variant counts and find repeat expansion outliers