Pinned Repositories
alacritty-theme
Collection of Alacritty color schemes
alphafold
Open source code for AlphaFold.
aoc
Advent of code
bcli
cpp-app-template
kmdiff
Differential k-mer analysis
kmercpp
kmindex
Index kmtricks bf matrices
kmtricks
modular k-mer count matrix and Bloom filter construction for large read collections
simka
Simka and SimkaMin are comparative metagenomics method dedicated to NGS datasets.
tlemane's Repositories
tlemane/kmtricks
modular k-mer count matrix and Bloom filter construction for large read collections
tlemane/kmindex
Index kmtricks bf matrices
tlemane/kmdiff
Differential k-mer analysis
tlemane/cpp-app-template
tlemane/kmercpp
tlemane/alacritty-theme
Collection of Alacritty color schemes
tlemane/alphafold
Open source code for AlphaFold.
tlemane/aoc
Advent of code
tlemane/bcli
tlemane/bioconda-recipes
Conda recipes for the bioconda channel.
tlemane/cfrcat
tlemane/biolib
Library containing useful building blocks for bioinformatics software
tlemane/cutevariant
A standalone and free application to explore genetics variations from VCF file
tlemane/gatb-core-stripped
tlemane/HowDeSBT
Sequence Bloom Tree, supporting determined/how split filters
tlemane/jc2bim-tp-bwt
tlemane/KaMRaT
tlemane/kff-cpp-api
A C++ API to read and write kff files
tlemane/kmdiff-experiments
tlemane/kmviz
A web interface for querying biological sequence indexes
tlemane/metaprofi
MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant genetic variants
tlemane/mini-miner
tlemane/ori-helper
tlemane/REINDEER
REINDEER REad Index for abuNDancE quERy
tlemane/sdsl-lite
Succinct Data Structure Library 2.0
tlemane/Simka-HowDeSBT
tlemane/tlemane.github.io
tlemane/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
tlemane/wgsim
Reads simulator
tlemane/write-a-C-interpreter
Write a simple interpreter of C. Inspired by c4 and largely based on it.