hidivelab
There are 27 repositories under hidivelab topic.
vitessce/vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
gosling-lang/gosling.js
Grammar of Scalable Linked Interactive Nucleotide Graphics
vitessce/vitessce-python
Python API and Jupyter widget for Vitessce
vitessce/vitessceR
R API and htmlwidget for Vitessce
keller-mark/pizzarr
Slice into Zarr arrays in R 🍕
keller-mark/anyhtmlwidget
Bringing core concepts from anywidget to R
hubmapconsortium/portal-ui
HuBMAP Data Portal front end
hubmapconsortium/tableschema-to-template
Given a Frictionless Table Schema, generate an Excel template with input validation
keller-mark/dynamic-importmap
Rewrite bare import specifiers at runtime in the browser
hms-dbmi/gehlenborglab-website
Code for Gehlenborg Lab website.
hubmapconsortium/ingest-validation-tools
HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
keller-mark/use-coordination
Implement coordinated multiple views in React-based visualization systems.
vitessce/vitessce-data
Utils for loading HuBMAP data formats
vitessce/vitessce-python-tutorial
Notebooks for HuBMAP tutorial session (January 2023)
gosling-lang/gosling-website
Documentation website of Gosling
inscidar/analysis-notebooks
The accessibility evaluation of life science resources
keller-mark/esbuild-py
Python bindings to the esbuild Transform API
hubmapconsortium/hubmap-api-py-client
Python client for the Cells API
hubmapconsortium/portal-visualization
Given HuBMAP Dataset JSON, creates a Vitessce configuration
keller-mark/miqc-py
Python implementation of miQC: probablistic quality control of scRNA-seq data
keller-mark/qdpx-to-json
Convert REFI-QDA .qdpx file into JSON and PNG files
thomcsmits/gehlenborglab-website
Code for Gehlenborg Lab website.
hubmapconsortium/portal-containers
Docker containers to pre-process data for visualization in the portal
hubmapconsortium/workspace_tutorial
Tutorial created for HuBMAP Data Portal Workspaces Fall 2024 Hackathon.
keller-mark/hd-vis-scripts
Download the full Semantic Scholar academic graph, then insert into an SQL database