singularity-container
There are 171 repositories under singularity-container topic.
apptainer/singularity
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
apptainer/apptainer
Apptainer: Application containers for Linux
ReproNim/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
kaczmarj/apptainer-in-docker
Apptainer in Docker!
ranwez/MACSE_V2_PIPELINES
This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated within singularity containers and sometimes combined in nextflow workflows.
ehw-fit/tf-approximate
Approximate layers - TensorFlow extension
hpcng/nomad-driver-singularity
HashiCorp Nomad driver plugin - Singularity
pydicom/dicom-containers
singularity and Docker containers to easily get started with common dicom tools
singularityhub/singularity2docker
convert a singularity image back to Docker, full circle! #containerfriends
dtrudg/clair-singularity
Scan Singularity container images using a Clair server
manuparra/singularitycontainers-on-m1-arm64
This is a repository containing a ready-to-use environment for singularity in arm64 (Apple M1).
E4S-Project/e4s-cl
Container manager for E4S
singularityhub/sregistry-cli
Singularity Global Client for container management
haavee/jiveplot
Python based plotting package for CASA MeasurementSet
maxemil/PhyloMagnet
screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics
ArangoGutierrez/Singularity-on-Nomad
The Singularity on Nomad tutorial documents how to deploy Singularity on Nomad.
singularityhub/singularity-catalog
The Singularity Community Catalog of Singularity* recipe files.
singularityhub/singularity-ci
example builders for Singularity images using continuous integration
alan-turing-institute/AI-workflows
A collections of portable, real-world AI workflows for testing and benchmarking
NYU-Molecular-Pathology/LG-PACT
NYU Langone Genome PACT (Genome Profiling of Actionable Cancer Targets) targeted exome sequencing analysis pipeline.
Serka-M/mmlong2-lite
Lightweight bioinformatics pipeline for microbial genome recovery
supercontainers/isc-tutorial
ISC 2023 -- Getting Started with Containers on HPC
felixdittrich92/Document_Scanner
this repository contains utils for post processing scanned documents and classify any kind of document for the given labels
ncar-xdev/repo2apptainer
Repo2apptainer: Wrapper around repo2docker producing Jupyter enabled Apptainer/Singularity images.
bencardoen/singularity_slurm_cuda
Example on how to get started with Singularity and CUDA on a SLURM cluster
bids-apps/ndmg
BIDS app for NeuroData's MRI to Graphs pipeline
mmore500/mwe-singularity-checkpoint
A minimal working example of DMTCP checkpoint-restart inside a Singularity container.
singularityhub/singularity.lang
xml syntax file for formatting Singularity recipes in gedit
GiancarloPaoletti/PBS_qsub_gridsearch
Simple bash script to launch gridsearch qsub jobs on PBS
roboticsleeds/isaac-orbit-container
Singularity container for Isaac Sim and Isaac Orbit with ROS Noetic.
singularityhub/paraview-visualizer
Singularity container recipes to run the paraview visualizer
bencardoen/singularity_julia
Template definition file for Singularity RO containers with Julia and user package embedded.
bencardoen/SPECHT.jl
SPECHT is a Julia implementation of a contrastive weakly supervised object detection and identification method for fluorescence microscopy.
kinow/cylc-singularity
Singularity containers for Cylc
legend-exp/legend-prodenv
LEGEND Data Production Environment
saravanabalagi/singularity_tensorflow
Singularity tensorflow containers for research and development