Center for Translational Data Science

Center for Translational Data Science @ University of Chicago

Chicago, IL

Pinned Repositories

arborist
Gen3 policy engine
Language:Go15 22 2216
cloud-automation
Automation for standing up Gen3 commons
Language:Shell41 31 27967
compose-services
Deploy Gen3 using Docker compose
Language:Python14 19 1239
data-portal
Windmill: data portal for metadata submission and query
Language:JavaScript29 31 17444
fence
AuthN/AuthZ OIDC Service
Language:Python38 30 20048
gen3sdk-python
Gen3 SDK for Python
Language:Python14 23 623
indexd
Index service server
Language:Python21 25 7620
metadata-service
The Metadata Service provides API for retrieving JSON metadata of GUIDs.
Language:Python15 15 110
peregrine
GraphQL search API service
Language:Python12 17 359
sheepdog
API for herding data submissions
Language:Python11 23 6517

Center for Translational Data Science's Repositories

uc-cdis/cloud-automation
Automation for standing up Gen3 commons
Language:Shell41 31 27967
uc-cdis/fence
AuthN/AuthZ OIDC Service
Language:Python38 30 20048
uc-cdis/indexd
Index service server
Language:Python21 25 7620
uc-cdis/gen3sdk-python
Gen3 SDK for Python
Language:Python14 23 623
uc-cdis/sheepdog
API for herding data submissions
Language:Python11 23 6517
uc-cdis/gen3-helm
Helm charts for Gen3 Deployments
Language:Smarty9 14 1624
uc-cdis/cdis-manifest
Manifests tracking service versions to release to each environment
Language:HTML8 13 07
uc-cdis/commons-frontend-app
Gen3 Data Commons template repository for gen3 frontend framework
Language:TypeScript415
uc-cdis/cirrus
Cloud Management Library (Wrapping Cloud APIs)
Language:Python3 18 70
uc-cdis/gen3-code-vigil
Gen3 Testing
Language:Python22
uc-cdis/gen3-frontend-framework
A Frontend Framework for Gen3 data portals
Language:TypeScript2 15 05
uc-cdis/gitops-qa
Language:HTML2 25 07
uc-cdis/gtex-dictionary
Data dictionary to collect GTEx dataset
Language:Python22
uc-cdis/bih_dictionary
The data dictionary for the MIDRC BDF Imaging Hub.
Language:Python1 8 02
uc-cdis/BRH-documentation
Official Documentation of the BRH Data Mesh
1 9 03
uc-cdis/containers
Language:Jupyter Notebook1 19 07
uc-cdis/gen3-discovery-ai
Gen3 Discovery AI
Language:Python1 10 0
uc-cdis/gen3-spark
Language:Dockerfile1 20 01
uc-cdis/gen3-terraform
Language:HCL1 8 0
uc-cdis/genomel_pipelines
GenoMEL pipelines in Bionimbus
Language:Python1 20 81
uc-cdis/heal-platform-sdk
Language:Python1
uc-cdis/google-bucket-manifest
Repos to store CDIS Google dataflow templates
Language:Python0 13 00
uc-cdis/bdc-data-commons
BDC using Gen 3.2
Language:TypeScript
uc-cdis/brh-data-commons
Gen3.2 Data Commons for BRH
Language:TypeScript
uc-cdis/docker-nginx
Official NGINX Dockerfiles
Language:Shell6 0
uc-cdis/ibdgc-tools
Language:Python15 0
uc-cdis/pdp_dictionary
The data dictionary for the Prometheus Data Platform (PDP).
Language:Python
uc-cdis/prometheus-data-platform
Gen3 based UI for Prometheus Data Platform
Language:TypeScript
uc-cdis/thor
Gen3 Release Orchestrator
Language:Python3
uc-cdis/vadc-data-commons
VADC Gen3 Data Commons repository for gen3 frontend framework
Language:TypeScript