uci-cbcl/UFold

Issues

• ufold_test.py error on clean install on Ubuntu 22.04.4 LTS

  #34 opened a month ago by alevitan-cajal
  0

• I just provide the sequence fasta file, so how to skip "[Pdb]" input

  #33 opened 3 months ago by DooYal
  2

• Asking for training set of RNAStrAlign

  #32 opened 4 months ago by heqin-zhu
  1

• CPU version

  #31 opened 7 months ago by dweemx
  1

• incompatible packages specified in the UFold.yml

  #25 opened a year ago by coffeebond
  5

• web server is down

  #26 opened a year ago by enc-kcotto
  6

• the data/input.txt is missing

  #29 opened a year ago by siduanmiao
  0

• Question about the performances of other models

  #28 opened a year ago by heqin-zhu
  2

• Training datasets

  #11 opened 2 years ago by andrewjjung47
  11

• Running on CPU

  #9 opened 2 years ago by rkruegs123
  2

• got error when processing training data

  #24 opened 2 years ago by sindax123
  5

• AttributeError when training data

  #23 opened 2 years ago by laiyii
  4

• RuntimeError: cuDNN error: CUDNN_STATUS_EXECUTION_FAILED

  #20 opened 2 years ago by sfsdfd62
  2

• ss_label dimension

  #21 opened 2 years ago by CatIIIIIIII
  2

• Having trouble installing on MacOS

  #22 opened 2 years ago by nlabrad
  1

• model.eval() mode

  #18 opened 2 years ago by giorgiobini
  1

• RuntimeError: cuDNN error: CUDNN_STATUS_EXECUTION_FAILED

  #19 opened 2 years ago by sfsdfd62
  0

• How can I get the complete RNAStralign dataset?

  #17 opened 2 years ago by llfzllfz
  2

• This error pops up when I tried to run Ufold

  #16 opened 2 years ago by sfsdfd62
  1

• Batch with different rna length

  #15 opened 2 years ago by giorgiobini
  2

• How can I generate the training datasets?

  #14 opened 2 years ago by llfzllfz
  1

• Why /ufold/config.json not have test attribute?

  #13 opened 2 years ago by llfzllfz
  1

• Training settings

  #7 opened 2 years ago by wahr0411
  3

• length RNA

  #10 opened 2 years ago by mtinti
  2

• model for prediction

  #8 opened 2 years ago by mtinti
  2

• RNA secondary structure

  #6 opened 2 years ago by KevinDante1207
  1

• original dataset for process_data_newdataset.py

  #5 opened 2 years ago by L0-zhang
  3

• Issues training custom model

  #4 opened 2 years ago by marcellszi
  2

• DNA sequences

  #2 opened 3 years ago by diegocastano123
  3

• Many Errors in Data and Test pipeline

  #3 opened 3 years ago by Rungetf
  2