Pinned Repositories
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
SEVtras
sEV-containing droplet identification in scRNA-seq data (SEVtras)
DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
STEMI-scRNA-seq
single cell experiments in STEMI participants
exceRpt
Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets
XDec
XDec (Expression Deconvolution) is a deconvolution tool for RNA-seq expression data. Starting with complex gene expression profiles of bulk tissue or biofluid samples, can estimate constituent cell type or cargo type composition of each input sample as well as gene transcription profiles of constituent cell/cargo types.
wangpenhok's Repositories
wangpenhok/exceRpt
Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets
wangpenhok/XDec
XDec (Expression Deconvolution) is a deconvolution tool for RNA-seq expression data. Starting with complex gene expression profiles of bulk tissue or biofluid samples, can estimate constituent cell type or cargo type composition of each input sample as well as gene transcription profiles of constituent cell/cargo types.