weitzner's Stars
ohmyzsh/ohmyzsh
🙃 A delightful community-driven (with 2,300+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python, etc), 140+ themes to spice up your morning, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.
ipython/ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
google-deepmind/alphafold
Open source code for AlphaFold.
tidyverse/ggplot2
An implementation of the Grammar of Graphics in R
biopython/biopython
Official git repository for Biopython (originally converted from CVS)
aqlaboratory/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
RosettaCommons/RFdiffusion
Code for running RFdiffusion
INRIA/scikit-learn-mooc
Machine learning in Python with scikit-learn MOOC
python-attrs/cattrs
Composable custom class converters for attrs, dataclasses and friends.
framps/raspiBackup
Create and keep multiple backup versions of your running Raspberries
nglviewer/ngl
WebGL protein viewer
baker-laboratory/RoseTTAFold-All-Atom
LPDI-EPFL/masif
MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
prody/ProDy
A Python Package for Protein Dynamics Analysis
Illumina/SpliceAI
A deep learning-based tool to identify splice variants
Edinburgh-Genome-Foundry/DnaChisel
:pencil2: A versatile DNA sequence optimizer
RosettaCommons/protein_generator
Joint sequence and structure generation with RoseTTAFold sequence space diffusion
rifdock/rifdock
Rifdock Library for Conformational Search
eichblatt/deadstream
A time machine to play GD tapes from archive.org
bcov77/silent_tools
A bunch of shell utilities for dealing the silent files
Edinburgh-Genome-Foundry/codon-usage-tables
:bar_chart: Codon usage tables in code-friendly format + Python bindings
alchemab/parapred-pytorch
PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
willsheffler/pymol
pymol scripts
ajasja/rosetta_pymol_utils
Helpful visualization in pymol for PDBs written by Rosetta
juampe/docker-pi-hole-dot
Pi-hole Docker image from pi-hole.net with unboud DNS over TLS providers
RosettaCommons/tools
Tools for parsing Rosetta source code and scripts for running specific Rosetta applications.
haydnKing/pyHMMER
Python wrapper for HMMER