Pinned Repositories
juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
SALSA
SALSA: A tool to scaffold long read assemblies with Hi-C data
rapt
Read Assembly and Annotation Pipeline Tool
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