wtsi-npg/npg_ranger

Issues

• Using conda devel channel to deploy samtools

  #230 opened 5 years ago by jmtcsngr
  1

• broken pipe does not result in 500

  #218 opened 5 years ago by GrishaH
  0

• Updating to Node 10

  #213 opened 5 years ago by GrishaH
  0

• Documentation regarding configuration & /references

  #212 opened 5 years ago by amanpatel
  1

• Accession is the unique identifier but may be non unique

  #182 opened 8 years ago by jmtcsngr
  0

• Reference is passed always as parameter but not necessary in all cases

  #181 opened 8 years ago by jmtcsngr
  0

• Timeout in DataAccess

  #175 opened 8 years ago by andrew-nowak
  1

• streaming client

  #47 opened 8 years ago by mgcam
  0

• Logging: 'user undefined is given access'

  #169 opened 8 years ago by andrew-nowak
  0

• Flexible search criteria

  #111 opened 8 years ago by dkj
  1

• In the context of filtering, be aware of http://www.odata.org/ -

  #146 opened 8 years ago by mgcam
  0

• straight file serving with byte-range

  #107 opened 8 years ago by dkj
  4

• a script/a few one-liners to load/update data for a single run to the mongodb database

  #134 opened 8 years ago by mgcam
  0

• inMemory mongodb engine for tests

  #123 opened 8 years ago by mgcam
  1

• tests and install mod_auth_openidc v.2.1.1

  #129 opened 8 years ago by mgcam
  0

• using ro user to access iRODS

  #54 opened 8 years ago by mgcam
  1

• Secure mongo db

  #112 opened 8 years ago by mgcam
  1

• Optimisation on NUMA architecture

  #124 opened 8 years ago by mgcam
  0

• use -d flag for logging level, add a flag to have a console logger

  #120 opened 8 years ago by mgcam
  0

• biodalliance: alternative start page to avoid hardcoding a reference

  #113 opened 8 years ago by mgcam
  1

• Temp folder name genarator produces clashes

  #116 opened 8 years ago by jmtcsngr
  0

• Biodalliance: accomodate VCF streams.

  #114 opened 8 years ago by mgcam
  0

• openid authorisation

  #48 opened 8 years ago by mgcam
  1

• Documentation needs updating for next release

  #95 opened 8 years ago by jmtcsngr
  0

• capture info about bioinf tools

  #90 opened 8 years ago by mgcam
  0

• config module improvements

  #87 opened 8 years ago by mgcam
  0

• Post merge, do not pipe through samtools view if required format is the same as input format.

  #42 opened 8 years ago by mgcam
  1

• server shutdown is slow

  #18 opened 8 years ago by mgcam
  1

• Compute md5 and send it in a trailer.

  #40 opened 8 years ago by mgcam
  1

• Option to run a cluster of servers.

  #41 opened 8 years ago by mgcam
  1

• server test suite for bioinf tasks

  #44 opened 8 years ago by mgcam
  1

• vcf files?

  #45 opened 8 years ago by mgcam
  1

• check trailer in a client

  #50 opened 8 years ago by mgcam
  1

• Only send trailers if client indicates it is willing to accept them

  #73 opened 8 years ago by andrew-nowak
  1

• mongo path to reference files incorrect

  #68 opened 8 years ago by andrew-nowak
  1

• Single point of request (Apache) for static files and NPG Ranger (through reverse proxy)

  #60 opened 8 years ago by jmtcsngr
  1

• proxy setting for a cli client

  #49 opened 8 years ago by mgcam
  1

• CORS error in data url obscured by error control in RangerRequest

  #55 opened 8 years ago by jmtcsngr
  0

• keeping the database (mongo or other) up-to-date

  #53 opened 8 years ago by mgcam
  0

• mongo or?

  #52 opened 8 years ago by mgcam
  0

• npg_ranger server deamon

  #51 opened 8 years ago by mgcam
  0

• phantomjs test for biodalliance

  #46 opened 8 years ago by mgcam
  0