Pinned Repositories
analysis2
Analysis for the second consortium paper.
ArchIE
A statistical framework for reference-free inference of archaic local ancestry
dadi-cli
Automated and distributed population genetic model inference from allele frequency spectra
dadi-cli-analysis
Snakemake pipelines for replicating the dadi-cli analysis
donni
machine learning applications for dadi
FILET
Software for detecting introgression using supervised machine learning
pgml
PGML Notes: Interactive Jupyter Notebooks for an Introduction to Population Genetics with Machine Learning
PopGenTools
A collection for available tools in population genetics
SeleDiff
A fast and scalable tool for estimating and testing selection differences between populations
sstar
Detecting Archaic Introgression from Population Genetic Data with S*
xin-huang's Repositories
xin-huang/dadi-cli
Automated and distributed population genetic model inference from allele frequency spectra
xin-huang/sstar
Detecting Archaic Introgression from Population Genetic Data with S*
xin-huang/PopGenTools
A collection for available tools in population genetics
xin-huang/pgml
PGML Notes: Interactive Jupyter Notebooks for an Introduction to Population Genetics with Machine Learning
xin-huang/SeleDiff
A fast and scalable tool for estimating and testing selection differences between populations
xin-huang/xin-huang.github.io
My Pages
xin-huang/analysis2
Analysis for the second consortium paper.
xin-huang/ArchIE
A statistical framework for reference-free inference of archaic local ancestry
xin-huang/dadi-cli-analysis
Snakemake pipelines for replicating the dadi-cli analysis
xin-huang/donni
machine learning applications for dadi
xin-huang/FILET
Software for detecting introgression using supervised machine learning
xin-huang/gaia
Genomic Analysis of Introgressed Alleles with Machine Learning
xin-huang/glottolog
Collaborative data curation for Glottolog
xin-huang/stdpopsim
A library of standard population genetic models
xin-huang/stone
悲喜千般同幻渺，古今一夢盡荒唐。
xin-huang/gpn
Genomic Pre-trained Network
xin-huang/introNets
xin-huang/Joint_Inference_DFE_demog_humans
xin-huang/Lithuanian-archaic-introgression
Revisiting Adaptive Introgression at the HLA Genes in Lithuanian Genomes with Machine Learning
xin-huang/maladapt
xin-huang/prml
xin-huang/TreeSeqPopGenInference
Exploring how to use tree sequences for multiple population genetic inference tasks.
xin-huang/tskit
The tree sequence toolkit
xin-huang/xin-huang