xin-huang/dadi-cli

Issues

• 1

  #7 opened 3 years ago by BaHole
  4

• TypeError was given when using GenerateCache

  #115 opened 6 months ago by jyw-atgithub
  7

• Remove --nomisid requirement for functions that use a dadi-cli inference output file

  #114 opened 7 months ago by tjstruck
  0

• Check AA info in the input VCF file if `--polarized` is used

  #105 opened 8 months ago by xin-huang
  1

• Update user guide

  #107 opened 8 months ago by xin-huang
  0

• priority of --maxtime and --force-convergence

  #108 opened 8 months ago by QianXiaobo
  1

• Remove stale branches

  #99 opened 9 months ago by xin-huang
  0

• --check-convergence & --force-convergence

  #98 opened 9 months ago by QianXiaobo
  2

• add an `--interactive` option to the `Plot` command

  #95 opened a year ago by xin-huang
  6

• Replace `multiprocessing.Queue` with `Manager.Queue`

  #96 opened a year ago by xin-huang
  0

• Issue with dadi-cli and the Numerics.py script

  #94 opened a year ago by kchiou
  1

• plot pdf blank/empty

  #90 opened a year ago by chapinkj
  4

• Loosen dependency requirements

  #78 opened 2 years ago by RyanGutenkunst
  3

• Use bounds in BestFit

  #79 opened 2 years ago by RyanGutenkunst
  2

• realSFS compatibility

  #61 opened 2 years ago by bibionid
  9

• CLI returning ValueError

  #59 opened 2 years ago by andrewkern
  5

• nlopt.RoundoffLimited: NLopt roundoff-limited

  #57 opened 2 years ago by bibionid
  4

• InferDM with snm_1d

  #54 opened 2 years ago by bibionid
  6

• nlopt.RoundoffLimited: NLopt roundoff-limited warning

  #53 opened 2 years ago by bibionid
  2

• different proportions from gamma and lognormal distributions

  #52 opened 2 years ago by xin-huang
  12

• H

  #6 opened 3 years ago by BaHole
  2

• Example and tests for --model_file

  #16 opened 3 years ago by RyanGutenkunst
  7

• Robust tests of Work Queue functionality

  #39 opened 2 years ago by RyanGutenkunst
  0

• GPU support through Work Queue

  #37 opened 2 years ago by RyanGutenkunst
  0

• repo2docker

  #24 opened 2 years ago by xin-huang
  0

• Godambe analysis for DFE is incorrect

  #13 opened 3 years ago by RyanGutenkunst
  1

• GenerateCache should accept custom model files

  #10 opened 3 years ago by RyanGutenkunst
  3

• Error with Travis-CI/GitHub automatic unit testing

  #15 opened 3 years ago by tjstruck
  2

• dadi.DFE.DemogSelModels.three_epoch not in conda-forge

  #14 opened 3 years ago by xin-huang
  1

• InferDFE should allow p0 to be optional

  #12 opened 3 years ago by RyanGutenkunst
  1

• Model names in DemogSelModels are unclear

  #11 opened 3 years ago by RyanGutenkunst
  2

• Default grid points for GenerateCache

  #9 opened 3 years ago by RyanGutenkunst
  0