header of result

[hanguojun007]

Hi @y9c , thanks very much!
i have got the final result. but i don't know what mean is the depth, gap,WT_ratio,WT_fraction. could you give me a detailed explanation ?
genome.zip

[y9c]

Hello,

In this dataset, the "depth" column represents the count of reads that cover a specific site, while the "gap" column signifies the count of reads containing gaps within that site. The "WT_ratio" column calculates the ratio of gaps to the depth for the WT sample, providing a measure of relative gap prevalence. Finally, the "WT_fraction" column represents the fraction of modification for the WT sample, taking into account the application of calibration curves.