zhan8855

Pinned Repositories

scFoundation
Language:Jupyter Notebook266 7 6342
cellxgene-census
CZ CELLxGENE Discover Census
Language:Jupyter Notebook88 23 62522
GrootVL
[NeurIPS2024 Spotlight] The official implementation of GrootVL: Tree Topology is All You Need in State Space Model
Language:Python83 3 112
zoology
Understand and test language model architectures on synthetic tasks.
Language:Python163 14 2128
caduceus
Bi-Directional Equivariant Long-Range DNA Sequence Modeling
Language:Python160 6 5023
CellPLM
Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
Language:Jupyter Notebook68 3 206
scPerturb
scPerturb: A resource and a python/R tool for single-cell perturbation data
Language:Jupyter Notebook109 5 266
GEARS
GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations
Language:Python210 6 8241
scPEP
Language:Python00