19831985's Stars
zhwang-hzau/CropPainter-master
CropPainter-An effective and precise tool for trait-to-image crop visualization based on Generative Adversarial Networks
cran/bnlearn
:exclamation: This is a read-only mirror of the CRAN R package repository. bnlearn — Bayesian Network Structure Learning, Parameter Learning and Inference. Homepage: https://www.bnlearn.com/
bobymathew/Bayesian-Multilocus
Bayesian-Multilocus contains R code for Bayesian Multilocus Estimation of two and three way epistasis presented in Mathew et al. (2018;Genetics):: https://www.genetics.org/content/208/2/525
mararie/SAMBAR
R package SAMBAR
slt666666/gene-cluster-matrix
Visualize gene clusters & its phylogenetic relationships by interactive matrix figure.
slt666666/RILStEp
Detect epistasis candidate SNP pair based on bayes factor
19831985/GridFree
An App counts the number of components in an image.
filipematias23/Bison-Fly_Workshop_01
In this workshop, I present step-by-step how we leverage UAV data in our breeding program. This is open source R code that anyone may use and adopt for different crops and situations. The Bison-Fly tutorial is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome (D2P). We hope this pipeline helps you with your research, and all suggestions to improve it are welcome.
easystats/correlation
:link: Methods for Correlation Analysis
filipematias23/FIELDimageR-Workshop-11
Workshop presented for NDSU Breeding Pipeline Database Managers. In this course, I went through the basic steps of the FIELDimageR pipeline showing how to evaluate and apply remote sensing data in plant breeding.
filipematias23/FIELDimageR-Workshop-9
Workshop presented for GEMS-UFSSER. In this course, I went through the basic steps of FIELDimageR pipeline showing how to evaluate and apply remote sensing data and lab images in plant breeding.
filipematias23/Be-Breeder
Be-Breeder 2.0 provides a series of functions and tools for phenotypic and molecular analyses to simulate and compare a wide range of breeding scenarios.
filipematias23/Bison-Fly
Bison-Fly is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome UAV community (D2P). In this pipeline we are presenting step by step how we have been applying UAV data on our breeding program. This is a open source R code from where anyone can use and adept for different crops. All suggestions are welcome. Help us to build this platform in partnership with Drone2Phenome community.
BGI-shenzhen/LDBlockShow
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
slowkow/ggrepel
:round_pushpin: Repel overlapping text labels away from each other in your ggplot2 figures.
PoisonAlien/maftools
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
omerwe/polyfun
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
YuLab-SMU/ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
stephenslab/mashr
An R package for multivariate adaptive shrinkage.
h3abionet/h3agwas
GWAS Pipeline for H3Africa
12HuYang/GridFree
An App counts the number of components in an image.
filipematias23/BGLR-R
MarcooLopez/Genomic-Selection
YinLiLin/KAML
:bicyclist: Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
YinLiLin/CMplot
📊 Circular and Rectangular Manhattan Plot