Issues
- 0
Extract frequency column - example 1
#55 opened by lumontana - 0
Different number of sites assumed vs. read
#54 opened by ardecasien - 17
Issue with glf file - too many sites
#47 opened by dgallery - 0
PCAngsd didn't converge
#53 opened by NeethuCherukuri - 0
- 0
Runtime
#51 opened by NicMAlexandre - 0
elevated KING relatedness
#50 opened by jmhallas - 1
autocorrelation?
#48 opened by cistarsa - 1
Something wrong with freq
#49 opened by EmmaLouMc - 2
use SM tag if using vcf/bcf
#17 opened by ANGSD - 0
Interpreting the inbreeding only Output.
#46 opened by john-proefrock - 5
Bad results starting from beagle files?
#45 opened by tida-one - 2
Problem with guess in emStep: -nan
#44 opened by Imogen-D - 2
unexpected high theta values
#41 opened by ma-diroma - 3
How does NgsRelate handle "missing data?"
#43 opened by TeresaPegan - 5
[Question] Merging ANGSD Outputs
#42 opened by fidibidi - 2
- 3
possible to convert beagle to binary beagle (doGlf 2 to doGlf 3) or use beagle file as input?
#39 opened by TeresaPegan - 1
- 4
PL field in VCF
#36 opened by ma-diroma - 0
- 0
make exit code if all sites are missing.
#23 opened by KHanghoj - 0
Add a LICENSE file
#37 opened by stephenturner - 19
"Problem with guess in emStep"
#18 opened by mcetincompbio - 3
verbose output
#32 opened by nwales - 4
Interpretation of relatedness (rab) coefficient
#35 opened by ma-diroma - 4
extract_freq_bim error
#34 opened by ma-diroma - 1
rmTrans option
#33 opened by nwales - 8
Problem with guess in emStep: 0.350616 0.350616 ... (unrelated to previous posts)
#30 opened by OKersten - 4
nIter = -1? Actually bestoptimll = -1?
#31 opened by kellybarr - 3
- 0
No output
#28 opened by mcetincompbio - 2
- 1
minor request to update readme
#25 opened by devonorourke - 6
Problem with guess in emStep
#22 opened by tristanpwdennis - 3
Problem reading full chunk error
#20 opened by AdamStuckert - 0
- 4
Wrong results?
#19 opened by mcetincompbio - 1
check ngsrelatev1 with the 3jaqs only still work
#14 opened by ANGSD - 1
check output is formattet correctly correct order
#15 opened by ANGSD - 1
cleanup spill files
#16 opened by KHanghoj - 0
- 0
output progress with many threads
#13 opened by ANGSD - 1
make threadpool to facilitate high number of cores
#12 opened by ANGSD - 1
- 2
please describe the new output
#10 opened by z0on - 1
fix makefile
#5 opened by ANGSD - 1
- 1
add an extra \n at end of program to the stdout
#7 opened by ANGSD - 1
Make option to print IDs
#4 opened by idamoltke