NicMAlexandre

Pinned Repositories

pilon
Pilon is an automated genome assembly improvement and variant detection tool
Language:Scala338 30 16960
ngsLD
Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework
Language:C++42 4 557
meryl
A genomic k-mer counter (and sequence utility) with nice features.
Language:C112 11 4611
ANHU
00
Minnow
00
Radish
00
split_by_2megabases
nextflow script to analyze chromosomes in 2Mb chunks
Language:Nextflow00
bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
Language:C648 48 1.9k240
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
Language:C1.6k 101 1.3k576
hyphy
HyPhy: Hypothesis testing using Phylogenies
Language:HyPhy205 22 1.3k69

NicMAlexandre's Repositories

NicMAlexandre/ANHU
00
NicMAlexandre/Minnow
00
NicMAlexandre/Radish
00
NicMAlexandre/split_by_2megabases
nextflow script to analyze chromosomes in 2Mb chunks
Language:Nextflow00