Pinned Repositories
cytof_report
An Rmarkdown report for analysis of CyTOF data
siteymlgen
Automatic _site.yml generation
TallyNN
single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
tRNAnalysis
tRNA analysis workflow
UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
cgat-apps
cgat-apps repository
cgat-core
Core functionality of the CGAT code
cgat-flow
cgat-flow repository
deseq2_report
Deseq2 automatic report generation
scflow
Single cell pipelines
Acribbs's Repositories
Acribbs/TallyNN
single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
Acribbs/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
Acribbs/tRNAnalysis
tRNA analysis workflow
Acribbs/siteymlgen
Automatic _site.yml generation
Acribbs/CGATPipelines
Collection of CGAT NGS Pipelines
Acribbs/kb_python
A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
Acribbs/website-personal
Acribbs/cytof_report
An Rmarkdown report for analysis of CyTOF data
Acribbs/ATAC_report
Acribbs/bioconda-recipes
Conda recipes for the bioconda channel.
Acribbs/blog
Jekyll blog
Acribbs/cgat-core
Core functionality of the CGAT code
Acribbs/code_hacks
Where I add all of the weird and wonderful code snippets I come accross
Acribbs/cribbs_cv
Acribbs/dagdata
Data for the HarvardX courses: PH525x
Acribbs/diffExpr_report
Acribbs/intro-to-R-talks
This repo contains two talks I gave as part of the Perception, Action & Cognition Lab Open Science Week, 2017 (University of Leeds)
Acribbs/IpythonTutorials
Acribbs/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Acribbs/ONT_VC
Analysis pipeline for ONT variant calling data
Acribbs/README-template.md
A README template for anyone to copy and use.
Acribbs/scAmpDesign
Design single-cell primers
Acribbs/shields
Concise, consistent, and legible badges in SVG and raster format
Acribbs/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Acribbs/targetDB
TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available about potential targets
Acribbs/testgit
Acribbs/trnaqc