ArtRand's Stars
codecrafters-io/build-your-own-x
Master programming by recreating your favorite technologies from scratch.
Nukesor/comfy-table
:large_orange_diamond: Build beautiful terminal tables with automatic content wrapping
nadavrot/layout
Layout is a rust library and a tool that renders Graphviz dot files.
tspeterkim/flash-attention-minimal
Flash Attention in ~100 lines of CUDA (forward pass only)
tracel-ai/cubecl
Multi-platform high-performance compute language extension for Rust.
mwlon/pcodec
Lossless codec for numerical data
sstadick/gzp
Multi-threaded Compression
beling/bsuccinct-rs
Rust libraries and programs focused on succinct data structures
esteinig/nanoq
Minimal but speedy quality control for nanopore reads in Rust :bear:
google/array_record
broadinstitute/poasta
Fast and exact gap-affine partial order alignment
bluenote-1577/flopp
flopp is a software package for single individual haplotype phasing of polyploid organisms from long read sequencing.
rust-seq/minimizer-iter
Iterate over minimizers of a DNA sequence
jdidion/pairwise-alignment
Catalogue of pairwise alignment algorithms and benchmarks
Lyn-liyuan/ndarray-cuda-matmul
a high-performance computing solution designed to accelerate matrix operations using Nvidia's CUDA technology with Rust's ndarray data structure.
AlgoLab/RecGraph
Optimal sequence-to-graph alignment with recombinations
MicrobialDarkMatter/nanomotif
Nanomotif - a tool for identifying methylated motifs in metagenomic samples
rust-or/lp-solvers
library implementing interaction with various linear programming solvers
KolmogorovLab/Wakhan
Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data
chfi/pafview
cschin/wavefront-aln
A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
tom-whitehead/hdbscan
axiomhq/hypertwobits
HyperTwoBits implementation
lukaslueg/hyperminhash
qingxiangguo/Computational-Medicine-and-Bioinformatics-Terminology-Database
A comprehensive mapping database, including detailed information, of the terminology and concepts in computational medicine and bioinformatics field.
bluenote-1577/sce-aligner
A basic seed-chain-extend aligner with linear-gap cost chaining and quadratic time extension for experiments
domodwyer/interavl
An optimised interval tree for efficient interval stabbing
natir/iitiiri
Implicit Interval Tree with Interpolation Index Rust Implementation
rnabioco/molb-7950
MOLB 7950: Informatics and Statistics for Molecular Biology
Adoni5/podders