Bh00mika

Bh00mika's Stars

• chriskiehl/Gooey

  Turn (almost) any Python command line program into a full GUI application with one line

  Language:Python20.7k2816031k

• garrettj403/SciencePlots

  Matplotlib styles for scientific plotting

  Language:Python7.2k6295715

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3.2k16910619

• quantopian/qgrid

  An interactive grid for sorting, filtering, and editing DataFrames in Jupyter notebooks

  Language:Python3k88288421

• stephenturner/oneliners

  Useful bash one-liners for bioinformatics.

  1.9k15510519

• HarshCasper/Rotten-Scripts

  Scripts that will make you go WOW!

  Language:Python1.5k21580488

• soedinglab/MMseqs2

  MMseqs2: ultra fast and sensitive search and clustering suite

  Language:C1.5k32836200

• dmnfarrell/pandastable

  Table analysis in Tkinter using pandas DataFrames.

  Language:Python63530227124

• jorvis/biocode

  Bioinformatics code libraries and scripts

  Language:Python5043160247

• crazyhottommy/bioinformatics-one-liners

  Bioinformatics one liners from Ming Tang

  457190128

• prody/ProDy

  A Python Package for Protein Dynamics Analysis

  Language:Python43525698158

• harmslab/pdbtools

  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files

  Language:Python17218765

• delalamo/af2_conformations

  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2

  Language:Python9041324

• twoXes/awesome-structural-bioinformatics

  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

  Language:Python682010

• lipan6461188/AlphaFold-StepByStep

  Run AlphaFold2 (and multimer) step by step

  Language:Python34515

• sami-chaaban/PlotAkta

  Convert Akta results from Unicorn 7 into a nicely formatted plot

  Language:Python14141

• Bio2Byte/public_notebooks

  Repository of Jupyter Notebooks created by the Bio2Byte group

  Language:Jupyter Notebook9300

• phiweger/foldvis

  Protein visualization without the pain

  Language:Jupyter Notebook9210

• ajasja/rosetta_pymol_utils

  Helpful visualization in pymol for PDBs written by Rosetta

  Language:Python8220

• kalekundert/wt_vs_mut

  A pymol plugin that makes it easy to compare the difference between two similar protein structures.

  Language:Python5541

• sami-chaaban/Colabfold

  Colabfold setup and scripts

  Language:Shell3100

• sami-chaaban/PointPAE

  Map AlphaFold PAE values on a model

  Language:Python3100

• aminoscape/alphafold2-cmaps

  Language:Jupyter Notebook2

• ismailuddin/fplc-chromatogram

  Python based tool for plotting FPLC chromatograms.

  Language:Jupyter Notebook2201

• justmwest/FPLC

  Scripts used in the analysis of FPLC data.

  Language:Python1200

• mabdulqader172/alphaParser

  A python software to parse AlphaFold/ColabFold results into PyMOL PSE and PAE plots.

  Language:Python1100

• mszegedy/paperclip

  Rosetta-based interactive tool to perform plotting and analysis on large batches of PDBs.

  Language:Python1200

• phiweger/ibm3202

  Google Colab Tutorials for IBM3202

  Language:Jupyter Notebook110

• phiweger/json2csv

  command line tool to convert json to csv

  Language:Go120

• phiweger/pdb-tools

  A dependency-free cross-platform swiss army knife for PDB files.

  Language:Python100