BiomedSciAI/histocartography
A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.
PythonAGPL-3.0
Issues
- 2
- 0
how to change the device id?
#60 opened by Extord1108 - 0
Pypi Installer issue
#58 opened by EncinasAlar - 2
Error: cannot import name 'greycomatrix' from 'skimage.feature' while importing histocartography
#48 opened by akhila1729 - 1
- 9
- 0
PyPi's skimage import
#52 opened by PeterrHH - 5
Environment dependency issue
#38 opened by jiaqiwu1999 - 0
- 1
- 0
Nuclei detection using StarDist?
#50 opened by ajinkya-kulkarni - 0
- 1
- 1
How to show just sub-graph of a certain class by graph-pruning-explaining, just like the pictures shown in the paper
#41 opened by xiaofochai - 1
CUDA Error
#43 opened by SaharAlmahfouzNasser - 0
Aborted (core dumped)
#45 opened by Parisa-Boodaghi - 1
How to Create a environment For GPU
#40 opened by JiangWenJie-stack - 2
Vahadane StainNormalizer raises error
#24 opened by NeelKanwal - 1
Memory issues with Nuclei Extractor
#13 opened by hossam-zaki - 1
multi-gpu usage
#20 opened by innerones - 1
HE Reference matrix
#28 opened by krishnakanagal - 1
Weights instead of model
#35 opened by Ramxnan - 1
Nuclei instance types
#31 opened by Abbas009 - 1
GraphGradCAMExplainer use of backpropogation
#36 opened by CarlinLiao - 1
- 2
The document not available
#37 opened by pfunami - 5
forward() missing 1 required positional argument: 'H'
#34 opened by Ramxnan - 2
Torch version issue
#33 opened by Ramxnan - 1
- 4
RuntimeError: unexpected EOF, expected 4530578 more bytes. The file might be corrupted.
#22 opened by yangyang117 - 1
Nuclei labels
#18 opened by elliewith - 1
about BRACS dataset
#11 opened by tikboaHIT - 0
Normalized array is overwritten when after creating GaussianTissueMask with downsampling_factor = 1
#26 opened by pablo-mas - 0
Process tensor with shape (batch,channels,w,h)
#25 opened by WxpHB - 0
Boundary condition bug?
#21 opened by wang101 - 4
Extract coordinates of nuclei in image
#12 opened by hossam-zaki - 6
Memory requirements
#8 opened by luiscarm9