Christina-hshi

Christina-hshi's Stars

• binary-husky/gpt_academic

  为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, moss等。

  Language:Python64.1k2701.6k7.9k

• junegunn/vim-plug

  :hibiscus: Minimalist Vim Plugin Manager

  Language:Vim Script33.9k3771k1.9k

• libfuse/libfuse

  The reference implementation of the Linux FUSE (Filesystem in Userspace) interface

  Language:C5.2k1625061.1k

• roy-ht/editdistance

  Fast implementation of the edit distance(Levenshtein distance)

  Language:C++659185861

• marbl/canu

  A single molecule sequence assembler for genomes large and small.

  Language:C++654542.3k179

• ventolab/CellphoneDB

  CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

  Language:Jupyter Notebook3171019251

• bernatgel/karyoploteR

  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

  Language:R296715342

• husky-team/husky

  A more expressive and most importantly, more efficient system for distributed data analytics.

  Language:C++98169655

• jpaulm/cppfbp

  C++ implementation of FBP, supporting Lua, using Boost

  Language:C72101019

• cuhk-eda/REST

  REST, a reinforcement learning framework for constructing rectilinear Steiner Minimum tree (RSMT)

  Language:C47537

• nf-core/circrna

  circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

  Language:Nextflow431056221

• Vizgen/vizgen-postprocessing

  Language:Python245295

• Christina-hshi/psirc

  Full-length linear and circular transcript isoform reconstruction and quantification

  Language:C11264

• adrienverge/copr-some-nice-fonts

  Some nice fonts including Arial, Courier New, Helvetica, etc. for Fedora and CentOS

  84

• Christina-hshi/SH-assembly

  K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours

  Language:C++7261

• TF-Chan-Lab/OMTools

  A software package for optical mapping data processing, analysis and visualization

  Language:Java7544

• Christina-hshi/CQF-deNoise

  CQF-deNoise enables fast k-mer counting with memory usage nearly unaffected by sequencing errors.

  Language:C++6111

• Christina-hshi/Bioinformatics-starter_kit

  This repository provides a collection of frequently used functions in the field of bioinformatics, such as RNA/DNA sequence processing.

  Language:Python3200

• flemingtonlab/public

  public repository for the Flemington lab

  Language:Perl310

• hahaschool/SAKURA

  SAKURA/桜(sakura)/🌸 : Single-cell data Analysis with Knowledge inputs from User using Regularized Autoencoders

  Language:Python3103

• Christina-hshi/Boosting-with-Husky

  Language:C++2210

• Christina-hshi/OMCas9Tools

  Computational tools for OM with CRISPR Cas9 labeling.

  Language:C++2200

• Christina-hshi/polyester-LC

  Bioconductor package "polyester", devel version. RNA-seq read simulator.

  Language:R2100

• braunslab/scRNA-seq--code-for-Sallan-et-al.-2023

  Code used for scRNA-seq analysis

  Language:Jupyter Notebook1