Cytoskeleton and Cell Shape (CyCelS)
Self-Organization lab studying the role of collective mechanics and coupling to reaction networks that determine cell shape and division. PI: Chaitanya Athale
India
Pinned Repositories
DICOT_cmd
Command line DIC Object Tracking (DICOT) code written inMATLAB to analyze DIC image time-series.
DICOT
3DPFM
3D printed focussing mechanism (3DPFM) for portable ball-lens microscope
bactMidcell
Bacterial mid-cell detection and blob analysis using ImageJ (macro).
cytosimAsterPatternFormation
Using the public cytoskeleton-motor mechanics simulation engine, this simulation parameter file illustrates conditions under which asters form "mechanoids" or polygonal cells in space.
AMTraK
MT-beating
Simulating single pinned MT in 2D
Spindle-Modeling-budding-yeast
In this project the motility dynamics of spindle pole body, nucleus and spindle is modeled during the cell cycle
Multi-aster-swaming
IISER_Project
Cell shape model
Cytoskeleton and Cell Shape (CyCelS)'s Repositories
CyCelsLab/MTKnotResolver
CyCelsLab/bacterialsizeScaling
Code relating to the scaling of bacterial cell size
CyCelsLab/diameterJ-modified
Modifying the FIJI installation of DIAMETERJ to remove errors that was preventing its use
CyCelsLab/Spindle-Modeling-budding-yeast
In this project the motility dynamics of spindle pole body, nucleus and spindle is modeled during the cell cycle
CyCelsLab/MT-beating
Simulating single pinned MT in 2D
CyCelsLab/AsterQuant
Multi aster system quantitative analysis using voronoi tessellation
CyCelsLab/DICOT_cmd
Command line DIC Object Tracking (DICOT) code written inMATLAB to analyze DIC image time-series.
CyCelsLab/DICOT
CyCelsLab/AMTraK
CyCelsLab/Multi-aster-swaming
CyCelsLab/cytosimAsterPatternFormation
Using the public cytoskeleton-motor mechanics simulation engine, this simulation parameter file illustrates conditions under which asters form "mechanoids" or polygonal cells in space.
CyCelsLab/bactMidcell
Bacterial mid-cell detection and blob analysis using ImageJ (macro).
CyCelsLab/3DPFM
3D printed focussing mechanism (3DPFM) for portable ball-lens microscope
CyCelsLab/IISER_Project
Cell shape model