DistributedScience/Distributed-CellProfiler
Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.
PythonNOASSERTION
Issues
- 2
Spot Fleet Request Configuration Invalid
#178 opened by znavidi - 3
Fix credential handling
#145 opened by ErinWeisbart - 2
Print easier to read memory used metrics?
#158 opened by ErinWeisbart - 0
- 2
Try/except handling for DOWNLOAD_FILES
#168 opened by bethac07 - 0
More documentation on using plugins
#138 opened by ErinWeisbart - 1
Change anything re: plugins?
#154 opened by ErinWeisbart - 1
- 0
Think about - exposing number of retries before dead messages in the config file
#165 opened by bethac07 - 2
- 2
Look into new role creation
#131 opened by bethac07 - 1
Enable S3FS mount of path within bucket
#137 opened by ErinWeisbart - 0
Add optional CloudWatch Agent
#176 opened by ErinWeisbart - 5
- 0
- 1
Need to update AMI for spot fleet config
#161 opened by Gabcomolet - 1
- 5
- 0
- 0
Improve logging
#156 opened by ErinWeisbart - 4
Add citation info
#149 opened by ErinWeisbart - 0
startCluster print error
#157 opened by ErinWeisbart - 5
Is /home/ubuntu/bucket mount point hardcoded?
#152 opened by sooheon - 2
Update cp-worker for readability?
#141 opened by ErinWeisbart - 0
Auto create Dashboards
#128 opened by bethac07 - 1
- 1
Input/Output metadata mismatch behavior
#124 opened by ErinWeisbart - 1
- 1
DOWNLOAD_FILES doesn't fully bypass S3FS
#132 opened by ErinWeisbart - 0
Update tag to 4.1.3?
#125 opened by dlogan - 2
ExportToDatabase and/or Path Mapping issues with DCP prevent batch data aggregation on AWS RDS - Workaround Added in Comments
#129 opened by mamrrmam - 1
dm.basesize doesn't work on new AMIs
#121 opened by bethac07 - 1
Support for multi-subnet fleets.
#115 opened by bethac07 - 0
Consider using pipeline.run() for CP4+
#111 opened by bethac07 - 5
Workers stop retrieving messages from queue
#100 opened by hirtem - 3
== ERR move failed
#123 opened by ErinWeisbart - 6
Need to update queue code
#133 opened by bethac07 - 4
Update Docker Image
#127 opened by MrHassanMurtaza - 1
Container Privilege Escalation and Read-Only Root File System -- is this needed?
#120 opened by aupadh12 - 1
Make DCP give volumes names too
#117 opened by bethac07 - 1
See if we can distinguish capacity errors from other errors on spot fleet startup
#107 opened by bethac07 - 1
Distributed Cell profiler on AWS EKS
#113 opened by mc35792 - 1
Add filter for CHECK_IF_DONE Bool
#110 opened by ErinWeisbart - 3
- 1
Clean up old files even if done file reports failure
#112 opened by bethac07 - 1
Images are not loaded for analysis
#106 opened by Mindaugas-Jonikas - 1
- 0
- 5
- 1