EasyPiPi

EasyPiPi's Stars

• crazyhottommy/getting-started-with-genomics-tools-and-resources

  Unix, R and python tools for genomics and data science

  Language:Shell1.1k345

• Anduin2017/HowToCook

  程序员在家做饭方法指南。Programmer's guide about how to cook at home (Simplified Chinese only).

  Language:Dockerfile66.4k8.7k

• ageron/handson-ml2

  A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

  Language:Jupyter Notebook27.7k12.7k

• RILAB/statements

  Successful Job Applications and Grants

  671125

• macarthur-lab/gene_lists

  List of gene lists for genomic analyses.

  Language:Python21581

• meyer-lab-cshl/snakemake-uge

  Language:Python83

• stephenturner/annotables

  R data package for annotating/converting Gene IDs

  Language:R16034

• GreenleafLab/ArchR

  ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

  Language:R377133

• hms-dbmi/UpSetR

  An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

  Language:R753152

• lmcinnes/umap

  Uniform Manifold Approximation and Projection

  Language:Python7.4k799

• KlugerLab/FIt-SNE

  Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

  Language:C++587107

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.1k963

• azofeifa/Tfit

  Transcription fit (Tfit) utilizes a generative model of RNA Polymerase to identify sites of divergent transcription in assays like GRO-seq, PRO-seq and GRO-cap

  Language:C++84

• tidyverse/dtplyr

  Data table backend for dplyr

  Language:R66358

• TysonStanley/tidyfast

  Fast and efficient alternatives to tidyr functions built on data.table #rdatatable #rstats

  Language:C++1874

• yonicd/bplyr

  basic dplyr and tidyr functionality without the tidyverse dependencies

  Language:R823

• LKremer/ggpointdensity

  :chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

  Language:R40524

• plaidml/plaidml

  PlaidML is a framework for making deep learning work everywhere.

  Language:C++4.6k400

• dpryan79/ChromosomeMappings

  This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

  22858

• huangyifeicmb/RNA-SEM

  RNA structural equation modeling

  Language:R11

• Danko-Lab/CD4-Cell-Evolution

  Analyses for an initial paper on the evolutionary CD4+ T-cell PRO-seq datasets.

  Language:R31