Issues
- 1
Query sequence from jackhmmer output not listed first after subsequent esl-alimerge merging
#333 opened by nawrockie - 2
HMMER error
#332 opened by mesti90 - 1
dropping columns that have only one sequence in it can fail at the N-terminus.
#331 opened by danielhhaft - 2
- 2
- 3
makehmmerdb segmentation issue
#328 opened by BioFalcon - 0
- 4
- 2
Extracting sequences from nhmmer `--tblout`
#325 opened by Euphrasiologist - 12
Feature request: Limit the MSA depth in Jackhmmer/Nhmmer/Phmmer/Hmmsearch
#323 opened by Augustin-Zidek - 0
Updating HMMER
#324 opened by eleanorwang - 6
- 3
Bug in hmmalign for multiple near-identical domains
#322 opened by mhampton - 6
hmmscan should just output tsv
#314 opened by nhartwic - 4
- 2
- 4
- 1
Error messages about illegal command-line options appear to be getting cut off in some cases
#317 opened by npcarter - 2
Parameters for building HMMs
#316 opened by sanyalab - 0
Filter results of hmmsearch
#315 opened by davidecrs - 2
Changelog Hmmer 3.4
#313 opened by davidbio - 2
- 1
read_asc{2,3}0hmm returning unset status
#311 opened by nawrockie - 4
`jackhmmer` returns "broken" homologs?
#308 opened by ayaanhossain - 1
hmmer compatibility with the Apple M1 chips
#300 opened by sunyj28 - 2
hmmscan cannot utilize multiple threads.
#306 opened by dianzhiyong - 6
- 1
Maximum sequence length HMMER can support
#304 opened by perryXuu - 1
standard realloc error when running hmmer in QIIME2
#295 opened by Krupa-17 - 2
- 1
- 6
domain can't be detected in the longer sequence
#296 opened by AlisaGU - 6
hmmpgmd test error
#279 opened by erick-dorlass - 1
select suitable sequence length
#297 opened by AlisaGU - 1
hmmalign cannot open my sequence file even though it is located in my hmmer directory
#299 opened by orspanish - 1
errors with running tutorial
#301 opened by MIndy123-cloud - 3
Unable to run create-profmark.c
#281 opened by wolf-Peng - 4
HMMER re-install on Mac M1
#283 opened by yunso123 - 2
Is AVX for hmmer3 still in process?
#285 opened by Gy-Lu - 5
HMMER3 fails to detect a valid flanking hit.
#290 opened by Thernn88 - 4
Error: No MAXL field in model(s)
#291 opened by TangShan99 - 2
- 3
nhmmer - Error: Invalid alphabet type in target for nhmmer. Expect DNA or RNA.
#294 opened by DJ-Champion - 1
Hmmbuild segmentation failure
#293 opened by spiceeeheu - 3
--incdomT cannot control the hit significance
#292 opened by ZhangDengwei - 6
make error at develop branch
#282 opened by wolf-Peng - 13
- 6
- 3
Problem installing hmmers
#287 opened by edzeta - 5
hmmemit: whoops, HMM is bad!
#284 opened by chasemc