Pinned Repositories
IsoQuant
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
OMArk
sequence-alignment-tools
String matching code-base originally designed for isobaric peptides
eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
GAG
Generates an NCBI .tbl file of annotations on a genome.
EnTAP
EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
EDTA
Extensive de-novo TE Annotator
DRAGO2-API
http://prgdb.org
MLDL
Python Code repository applicable for ML, DL uses in genomics, and bioinformatics
sanyalab's Repositories
sanyalab/DRAGO2-API
http://prgdb.org
sanyalab/MLDL
Python Code repository applicable for ML, DL uses in genomics, and bioinformatics