FeynmanDNA's Stars
NVIDIA/nvidia-docker
Build and run Docker containers leveraging NVIDIA GPUs
git-lfs/git-lfs
Git extension for versioning large files
jacobgil/pytorch-grad-cam
Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.
rmcelreath/stat_rethinking_2023
Statistical Rethinking Course for Jan-Mar 2023
pypa/flit
Simplified packaging of Python modules
JunMa11/SOTA-MedSeg
SOTA medical image segmentation methods based on various challenges
SimpleITK/SimpleITK
SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.
InsightSoftwareConsortium/SimpleITK-Notebooks
Jupyter notebooks for learning how to use SimpleITK
nipy/nipype
Workflows and interfaces for neuroimaging packages
SuperElastix/elastix
Official elastix repository
seung-lab/connected-components-3d
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
jnothman/UpSetPlot
Draw UpSet plots with Matplotlib
MIC-DKFZ/HD-BET
MRI brain extraction tool
niivue/niivue
a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
nipreps/niworkflows
Common workflows for MRI (anatomical, functional, diffusion, etc)
tomaroberts/nii2dcm
nii2dcm: NIfTI to DICOM creation with Python
nstucki/Betti-matching
menzelab/implicit-shape-reconstruction
berkanlafci/mvpsstudio
Multiview Photometric Stereo (MVPS) Studio Hardware and Software for 3D Reconstruction
bwittmann/GAV
A link prediction algorithm tailored to flow-driven spatial networks. Paper accepted @ WACV24
m1balcerak/GliODIL
Glioma Radiotherapy Design by Optimization of a Data and Physics Informed Discrete Loss
nipraxis/textbook
Repository for Nipraxis course textbook
SethLirette/CTP
Used to create perfusion maps of computed tomography perfusion
DeepMicroscopy/MIDOG_reference_docker
Reference implementation of domain-adversarial training on a RetinaNet (to use as template in the MIDOG challenge)
vnckppl/niipre
Nifti Preview
julianobarbosa/OpenSUSE-Python3
How to install Python3 in OpenSUSE from source
CompSoftMatterBiophysics-CityU-HK/Identify-Knot-Types-by-ML-PRE2020
Source code and data for "Identifying knot types of polymer conformations by machine learning" PhysRevE.101.022502
CoWBenchmark/TopCoW_Algo_Submission
Algorithm submission template repo for the TopCoW2023 challenge on grand-challnge
neurolabusc/dcm_qa_asl
DICOM to NIfTI/BIDS arterial spin labeling validation script
KTrzyna/CTP
Used to create perfusion maps of computed tomography perfusion