GATB/gatb-minia-pipeline

Issues

• OSError: [Errno 17] File exists

  #32 opened 2 years ago by mergi-2674
  1

• Flag to remove intermediate files

  #27 opened 4 years ago by bstamps
  4

• hdf5 issue - unable to open file

  #19 opened 5 years ago by Krannich479
  5

• BESST: error: argument -orientation is required

  #31 opened 3 years ago by Inexperiencedresearcher
  3

• ZeroDivisionError while running BESST

  #30 opened 4 years ago by cimendes
  1

• Problem with BESST in the pipeline

  #15 opened 5 years ago by xbarvazx
  12

• Question about input file type

  #29 opened 4 years ago by YuanwenGuo
  2

• Release package?

  #28 opened 4 years ago by levlafayette
  0

• BESST: error: unrecognized arguments: fr

  #25 opened 4 years ago by cimendes
  3

• GFA output

  #24 opened 5 years ago by ekg
  1

• warn user is not enough free memory

  #3 opened 5 years ago by rchikhi
  0

• print minia version in command line help

  #5 opened 5 years ago by rchikhi
  0

• check if -out is a folder (it shouldn't be!)

  #4 opened 5 years ago by rchikhi
  0

• test if bwa version is high enough

  #6 opened 5 years ago by rchikhi
  0

• gatb-pipeline requires a Linux 64 bits system

  #14 opened 5 years ago by anmwinter
  2

• make test failed and number of cores not limitable?

  #12 opened 5 years ago by jvollme
  5

• Execution of 'perl tools/sga-deinterleave.pl'

  #16 opened 5 years ago by Shirley-Q
  4

• Add version info on prerequisites

  #21 opened 5 years ago by nylander
  1

• Error with `make test`

  #22 opened 5 years ago by nylander
  3

• 920: syntax error in expression (error token is "920")

  #23 opened 5 years ago by osowiecki
  1

• Combining multiple libraries

  #20 opened 5 years ago by harish0201
  5

• Problems with assembling the data beyond kmer 127 and other queries.

  #17 opened 5 years ago by harish0201
  4

• --no-error-correction needs to appear in the command line parameters help

  #2 opened 8 years ago by rchikhi
  0

• Error with samtools in `make test`

  #8 opened 9 years ago by ppericard
  1

• save the stdout to a [prefix].log.txt file

  #1 opened 9 years ago by rchikhi
  1