HasiHays

2020plus

Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

awesome-biology

Curated (meta)list of resources for Biology.

awesome-cheminformatics

A curated list of Cheminformatics libraries and software.

awesome_spatial_omics

tools and notes for spatial omics

breast-cancer-sub-types

A novel self-supervised feature extraction method using omics data is proposed which improves classification in most of the classifiers.

CellClassificationMachineLearning

Single Cell Classification using RNA-seq data and Supervised Learning Algorithms

cheminformatics

Facilitates searching, screening, and organizing large chemical databases

Computational-Medicine

PyBioNetGen

A simple CLI for BioNetGen

scRNA-tools

Table of software for the analysis of single-cell RNA-seq data.

HasiHays/anndata2ri

Convert between AnnData and SingleCellExperiment

HasiHays/awesome-pinescript

A Comprehensive Collection of Everything Related to Tradingview Pine Script.

HasiHays/awesome-systematic-trading

A curated list of awesome libraries, packages, strategies, books, blogs, tutorials for systematic trading.

HasiHays/BayesSpace

Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.

HasiHays/Binance-Futures-Trading-Bot

A Technical Analysis Bot that trades leveraged USDT futures markets on Binance.

HasiHays/bulkDGD

Code, documentation, and tutorial for the DGD model trained on bulk RNA-Seq data.

HasiHays/cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

HasiHays/FICT

FISH Iterative Cell Typing

HasiHays/infercnv

Inferring CNV from Single-Cell RNA-Seq

HasiHays/infercnvpy

Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

HasiHays/Intro-to-rnaseq-hpc-salmon-flipped

Introduction to bulk RNA-seq

HasiHays/liana

LIANA: a LIgand-receptor ANalysis frAmework

HasiHays/lumibot

Backtesting and Trading Bots Made Easy for Crypto, Stocks, Options, Futures, FOREX and more

HasiHays/nichenetr

NicheNet: predict active ligand-target links between interacting cells

HasiHays/Nuwa

A bioinformatics web app for single cell RNA seq analysis.

HasiHays/omicverse

A python library for multi omics included bulk and single cell RNA-seq analysis.

HasiHays/OmnipathR

R client for the OmniPath web service

HasiHays/pagoda2

R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets

HasiHays/parallels-desktop

This is the crack version of parallels desktop

HasiHays/rapids_singlecell

Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

HasiHays/rnaseq_workflow

snakemake workflow for bulk RNA-seq workflow using STAR-edgeR

HasiHays/scGIST

HasiHays/SingleCellExperiment

Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.

HasiHays/smart-money-concepts

This is a python package for smart money concept indicators

HasiHays/SpatialDE

Test genes for Spatial Variation

HasiHays/squidpy

Spatial Single Cell Analysis in Python

HasiHays/trading-futures-tradingview-script

I write pine script to trade futures ES1 NQ1 with signal IN (accurate 90%) and now I am trading on that

HasiHays/tradingview

Market Profile and Footprint scripts (indicators) for TradingView.

HasiHays/vnpy

基于Python的开源量化交易平台开发框架

HasiHays/workshop-scRNAseq

Single cell RNA sequencing analysis course