ICB-DCM/PESTO

Issues

• Parallel mode in getMultiStarts in MATLAB

  #201 opened a year ago by aidinbii
  0

• plotParameterProfiles figure

  #200 opened 2 years ago by aidinbii
  0

• Negative parameter-limits (parameters.min and parameters.max)

  #197 opened 5 years ago by Tim212019
  5

• Update Doxygen Doc

  #125 opened 7 years ago by BBallnus
  1

• Update citation of PESTO in description

  #195 opened 6 years ago by LoosC
  0

• Hierarchical likelihood with only absolute measurements

  #194 opened 6 years ago by LoosC
  0

• getParameterProfiles produces error when fixed parameters are incorporated

  #193 opened 6 years ago by kjnousia
  1

• remove 'lower' in PTOptions and RAMPARTOptions

  #189 opened 6 years ago by LoosC
  0

• paper citation

  #180 opened 6 years ago by thomassligon
  1

• Fmincon Default Options

  #182 opened 6 years ago by yannikschaelte
  0

• No "Last Error in" output

  #184 opened 6 years ago by yannikschaelte
  0

• Hierarchical Optimization: Reordering of scaling options

  #130 opened 7 years ago by yannikschaelte
  1

• Restructure Pesto as Matlab package?

  #153 opened 7 years ago by paulstapor
  7

• Pom1 broken

  #178 opened 7 years ago by yannikschaelte
  1

• uniform as new default proposal

  #164 opened 7 years ago by AnnaFiedler
  1

• Wrong size of hessian with fixed parameters

  #173 opened 7 years ago by LoosC
  0

• Parameter Constraints

  #172 opened 7 years ago by LoosC
  0

• BarrierFunction: Hessian

  #171 opened 7 years ago by yannikschaelte
  0

• options.save folder name unsupported on windows

  #169 opened 7 years ago by yannikschaelte
  3

• Hierarchical Optimization: Respect Boundaries

  #168 opened 7 years ago by yannikschaelte
  2

• Bug when options.start_index is set

  #166 opened 7 years ago by AnnaFiedler
  0

• possibility to append parameter.MS struct

  #165 opened 7 years ago by AnnaFiedler
  0

• Pom example not up to date

  #155 opened 7 years ago by yannikschaelte
  0

• Poor Optimization Initializations lead to error

  #160 opened 7 years ago by BBallnus
  2

• Standard options

  #159 opened 7 years ago by yannikschaelte
  0

• fixed parameters

  #121 opened 7 years ago by JanHasenauer
  4

• corrupted `init.mat` when running profile calculation in parallel.

  #157 opened 7 years ago by FFroehlich
  0

• Duplicated code in options classes

  #128 opened 7 years ago by FFroehlich
  1

• Create a function for figure generation

  #154 opened 7 years ago by paulstapor
  0

• 'Warning: Imaginary parts of complex X and/or Y arguments ignored' in plotParameterUncertainty (line 277)

  #158 opened 7 years ago by FFroehlich
  0

• Parallel code needs reworking

  #151 opened 7 years ago by paulstapor
  0

• plotConfidenceIntervals - undefined 'boolWarning', doc bugs

  #134 opened 7 years ago by thomassligon
  0

• plotParameterProfiles doc bug

  #135 opened 7 years ago by thomassligon
  0

• doc bug Figure 1

  #136 opened 7 years ago by thomassligon
  0

• Different optimizer options for multistart and profiles

  #131 opened 7 years ago by FFroehlich
  3

• Restructure the assignment of result in getMultiStarts

  #150 opened 7 years ago by paulstapor
  0

• Error when using optimizer PSwarm

  #124 opened 7 years ago by LoosC
  0

• sortMultiStarts does not include AIC and BIC

  #118 opened 7 years ago by LoosC
  2

• Error using figure

  #142 opened 7 years ago by FFroehlich
  0

• PestoOptions inherits from mixin.GetSet

  #143 opened 7 years ago by FFroehlich
  6

• index name in saveResults

  #144 opened 7 years ago by FFroehlich
  0

• code divergence in getMultiStarts

  #156 opened 7 years ago by FFroehlich
  1

• Interface to Lsqnonlin

  #152 opened 7 years ago by paulstapor
  0

• Error with NLLH (objective function undefined at initial point)

  #146 opened 7 years ago by yannikschaelte
  0

• Issues in PestoSamplingIOptions

  #137 opened 7 years ago by FFroehlich
  2

• improvement of sampling pipeline

  #122 opened 7 years ago by JanHasenauer
  4

• tic toc issue on R2017b

  #138 opened 7 years ago by FFroehlich
  1

• error_count as option

  #129 opened 7 years ago by LoosC
  3

• Question about erbb_signaling example

  #126 opened 7 years ago by thomassligon
  5

• Re-add Lacki temperature adaptation schemes to RAmPART branch

  #119 opened 7 years ago by BBallnus
  0