MarionPerrier

MarionPerrier's Stars

• yangshun/tech-interview-handbook

  💯 Curated coding interview preparation materials for busy software engineers

  Language:TypeScript118k2.1k10214.7k

• cxli233/FriendsDontLetFriends

  Friends don't let friends make certain types of data visualization - What are they and why are they bad.

  Language:R6.4k1117243

• erikgahner/awesome-ggplot2

  A curated list of awesome ggplot2 tutorials, packages etc.

  1.6k4715167

• ewenme/ghibli

  Studio Ghibli colour palettes

  Language:R4187318

• schneebergerlab/plotsr

  Tool to plot synteny and structural rearrangements between genomes

  Language:Python28258328

• CompEpigen/figeno

  Tool for plotting sequencing data along genomic coordinates.

  Language:Python2496198

• iqtree/iqtree2

  NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org

  Language:C++2431421756

• lh3/pangene

  Constructing a pangenome gene graph

  Language:C1747148

• mikolmogorov/Ragout

  Chromosome-level scaffolding using multiple references

  Language:Python155168327

• TobyBaril/EarlGrey

  Earl Grey: A fully automated TE curation and annotation pipeline

  Language:Python138611320

• asl/BandageNG

  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

  Language:C++114129510

• tolkit/telomeric-identifier

  Identify and find telomeres, or telomeric repeats in a genome.

  Language:Rust11051912

• human-pangenomics/hpp_pangenome_resources

  963183

• vgl-hub/gfastats

  A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.

  Language:C++915238

• marschall-lab/panacus

  Panacus is a tool for computing statistics for GFA-formatted pangenome graphs

  Language:Rust855346

• TF-Chan-Lab/panGraphViewer

  Show pangenome graphs in an easy way

  Language:JavaScript522115

• edawson/gfakluge

  A C++ library and utilities for manipulating the Graphical Fragment Assembly format.

  Language:C++5134320

• jonassibbesen/rpvg

  Method for inferring path posterior probabilities and abundances from pangenome graph read alignments

  Language:C++464275

• estebanpw/chromeister

  A dotplot generator for large chromosomes

  Language:C394224

• pangenome/PanSN-spec

  Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes

  31431

• YuLab-SMU/treedataverse

  Meta package for processing and visualizing tree with data

  Language:R26411

• chmccarthy/Pangloss

  Pangenome analysis of eukaryotes.

  Language:Perl182124

• statdivlab/groves

  Tools for analyzing trees

  Language:R14501

• maglab/genefriends_v5

  Language:Vue5401

• mzytnicki/pansel

  Language:C++5100

• momeara/CalCEN

  Candida albicans co-expression

  Language:R3202

• emaubin/INTERCHANGE

  horIzoNtal TransfER CHAracterization in Non-assembled GEnome

  Language:Python210

• FredPont/Spatial_Background_Builder

  Language:Julia2100

• manjunath5496/Astrobiology-Books

  "Do there exist many worlds, or is there but a single world? This is one of the most noble and exalted questions in the study of Nature." ― Magnus Saint Albertus

  21

• Tharos-ux/pangenome-notes

  Notes upon pangenome graphs construction

  Language:TypeScript1000