UserWarning: Reached maximum number of 50 sequences for plotting, some sequences will not be plotted.

[thinkgenome]

For this warning, while I am analysing metagenome contigs, can I change some deepbgc parameters to incorporate all the results in plot.

[prihoda]

Unfortunately this limit is hardcoded, if you want to see all the sequences in the plot, you can:

1. Split the input contig files into maximum 50 sequences per file and process them with DeepBGC separately
2. Plot the results yourself using the score column in the output .pfam.tsv file.

[thinkgenome]

Thanks @prihoda