BUG: savepath issue within the run function in process.py
sidhulyalkar opened this issue · 3 comments
Version information:
Running version 1.0.1.dev7+gb40a61e, via git clone https://github.com/MouseLand/facemap.git
Describe the issue:
Currently the way that savepath is obtained errors when the savepath is not included in the proc(previous parameters) input and a savepath is specified, when a proc input is specified.
Line 703 in process.py, inside of the run function:
savepath = proc["savepath"] if savepath is not None else savepath
should be changed to ->
savepath = proc["savepath"] if savepath is None else savepath
Error message:
No response
Hi @sidhulyalkar can you please try installing the pip version and let us know if you get the same error.
Hi,
I am having the same issue (with a pip installation) when I try to batch process multiple videos with a single ROI saved to each video. One video with a ROI runs just fine.
Traceback (most recent call last):
File "C:\Users\SOFIE\anaconda3\envs\facemap\lib\site-packages\facemap\gui\gui.py", line 1217, in process_batch
savename = process.run(
File "C:\Users\SOFIE\anaconda3\envs\facemap\lib\site-packages\facemap\process.py", line 706, in run
savepath = proc["savepath"] if savepath is not None else savepath
KeyError: 'savepath'
numpy version: 1.24.3
python version: 3.8.17
QGridLayoutEngine::addItem: Cell (2, 0) already taken
QGridLayoutEngine::addItem: Cell (3, 0) already taken
** TORCH CUDA version installed and working. **
version 0.2.0
Hi @sidhulyalkar @sahrlund thanks for identifying the bug and suggesting a solution. The latest version on the main branch is fixed.