NCATSTranslator/TranslatorArchitecture

Issues

• Can we have two endpoints providing complelely different data using the same infores?

  #93 opened a year ago by edeutsch
  11

• Every KG needs primary knowledge source for every edge

  #86 opened 2 years ago by capasfield
  1

• All ARAs need to have a score that is bounded.

  #85 opened 2 years ago by capasfield
  1

• Asynchronous Status Check URLs

  #83 opened 2 years ago by MarkDWilliams
  4

• Creative: Implement "What gene's activity or abundance is decreased by a particular chemical?"

  #82 opened 2 years ago by cbizon
  0

• Creative: Implement "What gene's activity or abundance is increased by a particular chemical?"

  #81 opened 2 years ago by cbizon
  0

• Creative: Implement "What Chemical decreases a particular gene's activity or abundance"

  #80 opened 2 years ago by cbizon
  0

• Creative: Implement "What Chemical increases a particular gene's activity or abundance"?

  #79 opened 2 years ago by cbizon
  0

• Extra Information / Merging

  #77 opened 2 years ago by cbizon
  8

• Need example of graph-level metadata

  #23 opened 4 years ago by nlharris
  2

• We should agree on Qualifier policies to guide implementation of TRAPI 1.3

  #76 opened 2 years ago by edeutsch
  1

• How should we encode Qualifiers in /meta_knowledge_graph?

  #75 opened 2 years ago by edeutsch
  0

• How should we encode our different instances in SmartAPI?

  #71 opened 2 years ago by edeutsch
  16

• Capturing the context / intention of a query

  #69 opened 3 years ago by brettasmi
  1

• Rules for using Information Content?

  #64 opened 3 years ago by cbizon
  0

• Only workflowrunner or also workflow runner?

  #63 opened 3 years ago by edeutsch
  4

• Using incompatible synonym sets

  #62 opened 3 years ago by patrickkwang
  1

• SRI Parallel bl_lookup, edgenorm, nodenorm implementing -- June 22

  #47 opened 3 years ago by vgardner-renci
  2

• Complete Biolink 2.0 update -- August 4 (date change)

  #52 opened 3 years ago by vgardner-renci
  1

• Operations exposed -- July 22

  #53 opened 3 years ago by vgardner-renci
  2

• Metadata harmonization strategy in SmartAPI registry

  #59 opened 3 years ago by sierra-moxon
  1

• Notebook script "Using OntologyKP to get subclasses.ipynb" is not converting preferred curies

  #58 opened 3 years ago by ehinderer
  1

• Notebook script "Using OntologyKP to get subclasses.ipynb" is not TRAPI 1.1 compliant

  #57 opened 3 years ago by ehinderer
  1

• KP Source provenance standards -- July 1

  #48 opened 3 years ago by vgardner-renci
  3

• KPs and ARA implementing Biolink 2.0 -- July 28 (date change)

  #55 opened 3 years ago by vgardner-renci
  0

• ARA Source provenance standards -- July 7

  #50 opened 3 years ago by vgardner-renci
  2

• Workflow implemented -- July 29

  #54 opened 3 years ago by vgardner-renci
  3

• KP Entity subclass semantic operations -- July 15

  #51 opened 3 years ago by vgardner-renci
  2

• KP Predicate and Category Semantic Operations -- June 1

  #44 opened 3 years ago by vgardner-renci
  3

• KP / ARA Using (biolink 2.0) canonical predicate directions -- July 1

  #49 opened 3 years ago by vgardner-renci
  1

• ARAs returning numerical scores on results in the score property -- June 15

  #46 opened 3 years ago by vgardner-renci
  1

• KP Implementing /meta_knowledge_graph endpoint -- June 15

  #45 opened 3 years ago by vgardner-renci
  1

• KPs calling KPs?

  #40 opened 3 years ago by cbizon
  3

• Document "Best Practices" for Biolink Model / Translator management of Association / Edge 'relation' property CURIES (and associated prefixes)

  #17 opened 4 years ago by RichardBruskiewich
  0

• Initial Integration

  #12 opened 4 years ago by cbizon
  1

• Standards artifacts repository

  #8 opened 4 years ago by diatomsRcool
  4

• Add ability to feedback negative edges

  #6 opened 4 years ago by cmungall
  1

• Describe the process(es) for continuous integration (CI) of KP data into an aggregate knowledge graph (AKG)

  #3 opened 4 years ago by patrickkwang
  3

• Describe the behavior of the Service Registry and the responsibilities of Translator services thereto

  #1 opened 4 years ago by patrickkwang
  5

• Aggregated Graph type

  #4 opened 4 years ago by oneilsh
  4