nlharris
Program Manager for @berkeleybop; Chair of the Bioinformatics Open Source Conference (BOSC, https://www.open-bio.org/events/bosc/)
Lawrence Berkeley National LaboratoryBerkeley, CA
Pinned Repositories
berkeleybop.github.io
Homepages for the Berkeley BOP.
biolink-model
Schema and generated objects for biolink data model and upper ontology
linkml
Linked Open Data Modeling Language
SRIGovernance
Coordinating governance for the Translator community
.github
AI-Blocks
A powerfull and intuitive WYSIWYG interface that allows anyone to create Machine Learning models!
ontology-development-kit
Bootstrap an OBO Library ontology
homepage
Code for the OBF's new homepage
OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
nlharris's Repositories
nlharris/ontology-development-kit
Bootstrap an OBO Library ontology
nlharris/.github
nlharris/berkeleybop.github.io
Homepages for the Berkeley BOP.
nlharris/cv
Chris Mungall's academic CV
nlharris/environmental-exposure-ontology
Modular environmental exposures ontology
nlharris/envo
A community-driven ontology for the representation of environments
nlharris/explore
Community-curated topic and collection pages on GitHub
nlharris/go-annotation
This repository hosts the tracker for issues pertaining to GO annotations.
nlharris/human-phenotype-ontology
Ontology for the description of human clinical features
nlharris/icbo2022
ICBO 2022
nlharris/kg-covid-19
KG hub to produce a knowledge graph for COVID-19 and SARS-COV-2
nlharris/kgcl
Datamodel for KGCL (Knowledge Graph Change Language)
nlharris/linkml.github.io
Website/splash page for main LinkML project
nlharris/llm-change-agent
LLM Change Agent is a command-line tool designed to generate knowledge graph change language (KGCL) commands using various LLM models via prompts (GitHub issue description/comments).
nlharris/monarch-ui
A modern web UI for revealing and understanding Monarch Initiative information.
nlharris/mtip-tutorial
Managing Translational Informatics Projects Tutorial
nlharris/newsletter
repo for OBF community newsletter updates
nlharris/OBO-Dashboard
Summary Dashboard for Open Biological and Biomedical Ontologies
nlharris/OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
nlharris/ontobot-change-agent
A GitHub bot for modifying ontology resources.
nlharris/ontology-access-kit
Ontology Access Kit
nlharris/phenopacket-format
nlharris/phenopackets.github.io
phenopackets.org website
nlharris/sssom
Simple Standard for Sharing Ontology Mappings
nlharris/stuff
nlharris/the-turing-way
Host repository for The Turing Way: a how to guide for reproducible data science
nlharris/translator-developer-documentation
Official comprehensive "mkdocs/readthedocs" templated developer documentation for the Translator community and
nlharris/TranslatorArchitecture
nlharris/uberon
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
nlharris/upheno
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.