nlharris
Program Manager for @berkeleybop; Chair of the Bioinformatics Open Source Conference (BOSC, https://www.open-bio.org/events/bosc/)
Lawrence Berkeley National LaboratoryBerkeley, CA
Pinned Repositories
berkeleybop.github.io
Homepages for the Berkeley BOP.
biolink-model
Schema and generated objects for biolink data model and upper ontology
linkml
Linked Open Data Modeling Language
SRIGovernance
Coordinating governance for the Translator community
.github
AI-Blocks
A powerfull and intuitive WYSIWYG interface that allows anyone to create Machine Learning models!
ontology-development-kit
Bootstrap an OBO Library ontology
homepage
Code for the OBF's new homepage
OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
nlharris's Repositories
nlharris/AI-Blocks
A powerfull and intuitive WYSIWYG interface that allows anyone to create Machine Learning models!
nlharris/ARAST_SDK
nlharris/DataFileUtil
nlharris/fba_tools
A suite of metabolic modeling tools created using the KBase SDK
nlharris/FBAFileUtil
Functions for accessing and saving KBase FBA related data as files.
nlharris/galaxy-hub
Galaxy Community Hub
nlharris/HTMLFileSetServ
Dynamic HTTP service that serves up the contents of HTMLFileSets.
nlharris/invocation
The invocation service provides remote invocation of commands. A java script browser client for interactive remote invocation (IRIS) is included. This deploys the client, service and javascript web application.
nlharris/kb_ballgown
http://bioconductor.org/packages/release/bioc/html/ballgown.html
nlharris/kb_fastqc
nlharris/kb_muscle
nlharris/kb_PRINSEQ
KBase SDK wrapping of PRINSEQ (specifically for the low complexity filtering)
nlharris/kb_quast
KBase wrapper for the QUAST assembly quality assessment tool.
nlharris/kb_sdk
nlharris/kb_uploadmethods
nlharris/kbase-ui
kbase-ui components
nlharris/kbase-ui-plugin-auth2-client
nlharris/kbase-ui-plugin-bulk-ui
nlharris/kbase-ui-plugin-dashboard
nlharris/metrics
Scripts and other tools for collecting metrics and generating reports and summaries.
nlharris/monarch-app
Monarch web application and API
nlharris/narrative
nlharris/NarrativeService
nlharris/NarrativeViewers
nlharris/project_guides
This repo contains documents and guides that describe project principles, how-to docs, etc.
nlharris/ProkkaAnnotation
nlharris/RAST_SDK
nlharris/roadmap
Official roadmap for the KBase project
nlharris/SpeciesTreeBuilder
nlharris/ui-common