NCBI-Hackathons/NovoGraph

Issues

• Configuring tzdata stops with this interactive dialog

  #42 opened 4 years ago by HediaTnani
  2

• CALLMAFFT.pl with --qsub 1

  #20 opened 4 years ago by TorHou
  3

• update CRAM2VCF_createFinalVCF.pl

  #33 opened 4 years ago by TorHou
  1

• running BAM2MAFFT. public.q issue

  #39 opened 4 years ago by SAMtoBAM
  15

• sam2alignment aborted

  #36 opened 4 years ago by Boer223
  15

• CRAM2VCF.cpp needs a lot of memory

  #23 opened 5 years ago by TorHou
  1

• Is it possible to get the contig list for VCF records?

  #21 opened 4 years ago by JYLeeBioinfo
  2

• bsub for CALLMAFFT.pl

  #15 opened 6 years ago by christinawu2008
  1

• Died at ../../../NovoGraph-1.0.0/scripts/BAM2ALIGNMENT.pl line 246.

  #38 opened 4 years ago by SAMtoBAM
  3

• Issues with alignment processing

  #17 opened 5 years ago by RenzoTale88
  6

• CALLMAFFT.pl for torque6.1.12

  #18 opened 5 years ago by JYLeeBioinfo
  6

• Genomes other than human

  #16 opened 6 years ago by gbdias
  1

• could not find `dealWithTooManyCIGAROperations.pl`

  #14 opened 6 years ago by iwangtoknow
  3

• MetaNWAlgo Pipeline

  #13 opened 6 years ago by aartijajoo88
  1

• Name all the things

  #12 opened 6 years ago by evanbiederstedt
  8

• CSHL graph genome talk

  #11 opened 6 years ago by evanbiederstedt
  2

• parsedAlternates error on vg call

  #10 opened 6 years ago by jcoliver
  4

• re-parallelize the MAFFT layer

  #8 opened 6 years ago by nathandunn
  0

• remove unnecessary copy operation

  #7 opened 6 years ago by nathandunn
  0

• JGA---convert into Cython, and then add into pipeline

  #6 opened 6 years ago by evanbiederstedt
  0

• Samples argument for vcf2bam

  #5 opened 6 years ago by jcoliver
  3

• Create optimal window "size" algorithm

  #2 opened 6 years ago by evanbiederstedt
  0

• vg call throwing error from tabix

  #9 opened 8 years ago by jcoliver
  2

• Multiple Sequence Alignment tool?

  #3 opened 8 years ago by jcoliver
  1

• bam to vcf converter

  #1 opened 8 years ago by ajo2995
  0