NifTK/NiftyNet

Issues

• Segmentation classes description not available

  #489 opened 3 years ago by AkhilaPhenomx
  0

• dense-vnet to Monai

  #488 opened 4 years ago by lroyer-star
  1

• How to train a model with one input and multi-output?

  #487 opened 4 years ago by amir-sanaat
  0

• using other DL framework

  #486 opened 4 years ago by szhang963
  0

• Niftynet window aggregator function for inferens - explaination needed

  #485 opened 4 years ago by jamtheim
  0

• Feature: Rewrite NiftyNet to use TensorFlow 2.0

  #481 opened 4 years ago by snorrealm
  1

• NiftiNet Roadmap

  #484 opened 4 years ago by hjmjohnson
  2

• Control the GPU memory allocation

  #435 opened 5 years ago by carlpe
  6

• Using NiftyNet to do segmentation of MRI scans(in .nii extension) to grey matter,white matter and csf

  #483 opened 4 years ago by natli-think
  0

• TensorRT frozen graphs - integration with NiftyNet

  #480 opened 4 years ago by carlpe
  0

• Inference produces dotted segmentation output [deepmedic]

  #417 opened 5 years ago by andreasstefani
  3

• AdamW optimizer

  #479 opened 4 years ago by bcdarwin
  0

• Sections containing `csv_data_file` are not loaded

  #478 opened 4 years ago by javierbg
  0

• Handle SimpleITK's lack of thread safety

  #476 opened 4 years ago by bcdarwin
  0

• Float comparison in histogram normalisation layer

  #472 opened 4 years ago by fepegar
  0

• Default values for the bias field layer might be too large

  #471 opened 4 years ago by fepegar
  0

• Remove unconnected islands

  #470 opened 4 years ago by carlpe
  0

• If Niftynet supports Xavier initialization?

  #469 opened 4 years ago by lixin14222
  0

• KeyError: 'total_loss' in deep_boosted_regression application

  #454 opened 4 years ago by hasansari
  1

• Support for tensorflow 1.15

  #459 opened 4 years ago by tvercaut
  1

• upgrade to support tensorflow 1.15

  #465 opened 4 years ago by wyli
  0

• problems to run niftynet

  #446 opened 5 years ago by yuniorcf
  7

• GPU->CPU Memcpy failed (pip version of tensorflow)

  #445 opened 5 years ago by IsaacLord
  3

• GPU->CPU Memcpy failed

  #436 opened 5 years ago by talmazov
  6

• Using GANs without conditioning

  #464 opened 5 years ago by hasansari
  0

• Provided indices are out-of-bounds w.r.t. dense side with broadcasted shape. Histogram error?

  #463 opened 5 years ago by EndritPJ
  1

• Expected size of adding custom dataset for classification task on MR dataset?

  #462 opened 5 years ago by Aliktk
  0

• Multi-GPU initialisation issue

  #461 opened 5 years ago by danieltudosiu
  0

• Implement FixUp Layer

  #460 opened 5 years ago by danieltudosiu
  0

• SubPixel Convolution Upgrade

  #457 opened 5 years ago by danieltudosiu
  1

• How do I use 'vars_to_restore' and 'vars_to_freeze'

  #455 opened 5 years ago by Endousan
  0

• CRITICAL:niftynet: Don't know how to generate sampling locations: Spatial dimensions of the grouped input sources are not consistent. {(512, 512, 102), (512, 512, 92)} 2019-09-27 17:21:51.189240: W tensorflow/core/framework/op_kernel.cc:1261] Unimplemented: NotImplementedError:

  #443 opened 5 years ago by zhaoxiaoqian666
  7

• Getting High Error between the Patch in Generated images

  #449 opened 5 years ago by IsaacLord
  0

• FEATURE: different padding modes for different inputs

  #448 opened 5 years ago by brynolff
  0

• How does the mask operation work? Train with Image/Label/Mask and test only with "image".

  #441 opened 5 years ago by maz369
  1

• Problem with Installation of Niftynet (incompatible version of numpy and tensorbord between tensorflow and Niftynet)

  #447 opened 5 years ago by IsaacLord
  8

• Unexpected behaviour of weighted sampler

  #432 opened 5 years ago by fepegar
  2

• what does iteration mean in the configuration file?

  #438 opened 5 years ago by 12neurotool
  1

• Overlap in window outputs with border parameter

  #437 opened 5 years ago by manuel-lincbiotech
  0

• Segmentation evaluation creates accumulative n_pos_ref across all labels.

  #433 opened 5 years ago by carlpe
  1

• Segmentation loss

  #427 opened 5 years ago by poorneshwaran
  4

• Classification task

  #429 opened 5 years ago by ProofOC
  0

• Why are the preprocessing layers deepcopied?

  #428 opened 5 years ago by fepegar
  3

• custom optimization

  #426 opened 5 years ago by poorneshwaran
  2

• Links to papers on https://niftynet.io/ not working

  #424 opened 5 years ago by fepegar
  2

• Mixup / Mixmatch capability?

  #419 opened 5 years ago by chazzmoney
  4

• Developing a new network and get weights from previous layers

  #414 opened 5 years ago by andreasstefani
  5

• model saving based on validation feedback

  #421 opened 5 years ago by koriavinash1
  0

• intermediate layer feature activations

  #420 opened 5 years ago by koriavinash1
  1

• NiftyNet layers are not compatible with tf.cond

  #413 opened 5 years ago by danieltudosiu
  1