PDB-REDO/dssp

Issues

• Publish as Conda package

  #86 opened 3 months ago by padix-key
  3

• Succeed to use command lane but fail to use python script from Bio.PDB.DSSP import DSSP

  #87 opened 3 months ago by HaoDingg
  3

• Error upon build

  #85 opened 4 months ago by elisedlfg
  3

• dssp 4.4.7 needs to link to libatomic on some 32-bit platforms (arm, ppc, mips): `Undefined symbols: "___atomic_store_8"`

  #84 opened 4 months ago by barracuda156
  0

• Dictionary not found or defined (mmcif_pdbx)

  #83 opened 5 months ago by drewaight
  2

• docker build failure

  #82 opened 5 months ago by cycle20
  0

• feature request: input/ouput without writting files to disk

  #81 opened 6 months ago by lmiq
  2

• Fill empty columns

  #80 opened 7 months ago by Sherman-1
  5

• Error while loading dictionary mmcif_pdbx.dic

  #77 opened 8 months ago by soumya-dutt
  2

• why i can not use dssp in python

  #78 opened 8 months ago by tomlongcool
  1

• Allow for the use system version for libmcfp

  #79 opened 8 months ago by reneeotten
  4

• large memory usage in pdb file from ESMFold

  #66 opened 8 months ago by jasondbiggs
  1

• libmcfp changes break installation

  #76 opened 8 months ago by merterden98
  2

• No download info given for 'dssp' and its source directory

  #74 opened 10 months ago by lewisbb
  20

• Feature request: Conda package support for DSSP

  #72 opened 10 months ago by gcroci2
  5

• v4.4.5 is a tag but not a release - is this intended?

  #73 opened a year ago by yurivict
  1

• missing file when compile

  #71 opened a year ago by Heisenburger2020
  2

• dssp-4.4.3: unit-test-dssp.cpp(247): error: in "dssp_3": check f.is_valid() has failed

  #70 opened a year ago by pacho2
  7

• Question about cif output.

  #69 opened a year ago by shuuul
  2

• DSSP fails with generated cif file

  #68 opened a year ago by shuuul
  3

• DSSP's webserver is misbehaving

  #67 opened a year ago by alexmplastow
  1

• DSSP fails on windows?

  #63 opened a year ago by lmiq
  6

• 1 test fails

  #65 opened a year ago by yurivict
  1

• dssp-4.4.0 introduces an automagic dependency on pandoc

  #64 opened a year ago by pacho2
  7

• Memory error

  #57 opened a year ago by Jiawei-Xing
  2

• Cifpp error

  #59 opened a year ago by farmacyst99
  2

• Request for release binary

  #61 opened a year ago by rcedgar
  7

• Downcase residua unknown

  #60 opened a year ago by jackhu3301
  1

• apt-get

  #58 opened 2 years ago by cbaakman
  2

• setting cifpp_DIR

  #56 opened 2 years ago by daen0435
  2

• Error parsing PDB with GROMACS generated PDB files

  #55 opened 2 years ago by Theguywhooccurs
  1

• Allow DSSP to work with alternative header

  #54 opened 2 years ago by DaniBodor
  5

• installation problem on WSL / Ubuntu20.04

  #53 opened 2 years ago by DaniBodor
  1

• cmake error @ cbaakman

  #52 opened 2 years ago by K-kiran90
  2

• Rsync cannot connect

  #51 opened 2 years ago by BJWiley233
  3

• Compilation error

  #50 opened 2 years ago by davidecarlson
  4

• AlphaFold pdb files fail with "Expected record CRYST1 but found ATOM"

  #49 opened 2 years ago by rcedgar
  6

• PDB input: parse error at line 1: This file does not seem to be an mmCIF file

  #48 opened 2 years ago by yunxiangz
  3

• Exception: DSSP failed to produce an output

  #47 opened 2 years ago by kanghui-learning
  9

• Problem installing DSSP 4.0

  #44 opened 2 years ago by maryammajd
  2

• cmake compilation fails (libconfig not found)

  #45 opened 2 years ago by vcojocaru
  3

• error when install dssp

  #46 opened 2 years ago by kanghui-learning
  1

• PDB2Cif error

  #43 opened 2 years ago by Yiqiu-Zhang
  1

• Error

  #38 opened 2 years ago by onlyonewater
  3

• Poly G reported as Poly Pro helix?

  #42 opened 2 years ago by hrp1000
  1

• Error in cmake build

  #41 opened 2 years ago by otienoanyango
  2

• Error linking mkdssp and unit-test

  #40 opened 2 years ago by cbaakman
  10

• Compatibility with Concoord

  #39 opened 2 years ago by TomUnter
  3

• Heap buffer overflow in dssp.cpp

  #37 opened 3 years ago by Augustin-Zidek
  1

• Expose "hidden options"

  #36 opened 3 years ago by multimeric
  7