Pinned Repositories
mykrobe
Antibiotic resistance prediction in minutes
atlas
atlas
atlas-var
atlas-var
BIGSI
BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data
bigsi-ebi-api
API service for EBI's BIGSI
ga4gh-mongo
A document based Variant database schema inspired by ga4gh Variants schema.
mccortex
Cortex on steroids: for larger populations with better assembly
metasort
A Digital Health Hack Weekend Project using OneCodex API. Filter reads based on taxonomy assignment from OneCodex.
Phelimb's Repositories
Phelimb/BIGSI
BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data
Phelimb/atlas
atlas
Phelimb/metasort
A Digital Health Hack Weekend Project using OneCodex API. Filter reads based on taxonomy assignment from OneCodex.
Phelimb/bigsi-ebi-api
API service for EBI's BIGSI
Phelimb/ga4gh-mongo
A document based Variant database schema inspired by ga4gh Variants schema.
Phelimb/mccortex
Cortex on steroids: for larger populations with better assembly
Phelimb/atlas-var
atlas-var
Phelimb/bioconda-recipes
Conda recipes for the bioconda channel.
Phelimb/clockwork
CRyPTIC data processing pipelines
Phelimb/codemonkeys
Code samples for a WTCHG codemonkey talk
Phelimb/mantis
Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index
Phelimb/mykrobe-atlas-cli
Cli tools for Mykrobe atlas and Mykrobe predictor
Phelimb/Mykrobe-predictor
This repo has moved to: https://github.com/Mykrobe-tools/mykrobe
Phelimb/okta-vue-node-example
Example of a Basic CRUD App with Vue.js and Node
Phelimb/phel.im
phelimbradley.com
Phelimb/pyseqfile
Fast parsing of multiple sequence file formats using seq_file
Phelimb/readuntil-server
Phelimb/Singularity_recipes
Repository with all my Singularity recipes
Phelimb/PAC
Phelimb/twillio-sms-survey-2