PopicLab/cue

Issues

• pysam pysam/libcbcf.pyx error when opening vcf.format file

  #21 opened a year ago by minjaf
  2

• TypeError: only integer tensors of a single element can be converted to an index

  #18 opened 2 years ago by shenweima
  3

• bcftools: undefined symbol: cblas_ctrmv

  #34 opened 3 months ago by leajf4
  0

• Does cue have any recommended genotyping software

  #33 opened 4 months ago by zhujiahua700403
  0

• Does cue apply to non-human species

  #32 opened 6 months ago by zhujiahua700403
  0

• Low number of SVs

  #31 opened 6 months ago by lubertorubior
  0

• 0 Selected intervals and empty VCF output when running Cue on PacBio CLR

  #14 opened a year ago by LYC-vio
  4

• Linked reads model

  #20 opened a year ago by pontushojer
  6

• installation error

  #30 opened 9 months ago by leon945945
  1

• How to translate the vcf result to the type same to the type such as manta and delly

  #24 opened 10 months ago by ld9866
  1

• Could you please provide a tutorial notebook or docker image for generating image datasets from scratch?

  #29 opened a year ago by kuro7766
  1

• KeyError: 'None-HET'

  #26 opened a year ago by kuro7766
  1

• add_by_signal function error when running call.py

  #28 opened a year ago by bbunce
  2

• Request for a docker image

  #27 opened a year ago by sdemirci
  1

• ModuleNotFoundError: No module named 'engine'

  #16 opened 2 years ago by shenweima
  2

• the difference among cue-synth-datasets/benchmarks/basic/cue/linked, long and short?

  #23 opened a year ago by jingydz
  0

• Tutorial Error

  #22 opened a year ago by jkalleberg
  1

• cue application on exome

  #19 opened a year ago by marcelamtrucco
  1

• LINKED mode of cue

  #13 opened 2 years ago by KeqingWangg
  3

• How to integrate the results of multiple individuals？

  #17 opened 2 years ago by shenweima
  0

• Docker Install Error

  #11 opened 2 years ago by 543090lee
  0

• Issue while outputting the svs.vcf file

  #9 opened 2 years ago by sivianil
  5

• Use with long-reads

  #2 opened 2 years ago by Akazhiel
  1

• Error message `_pickle.UnpicklingError: invalid load key, 'v'.` in the SV calling step

  #3 opened 2 years ago by LorenaDerezanin
  1

• Error message _pickle.UnpicklingError: invalid load key, 'v'.

  #4 opened 2 years ago by williamphu
  1