Issues
- 2
Question about Red Herrings
#385 opened by dplassard - 1
SMARCA4 fusion with lincRNA
#386 opened by asaki1986 - 8
BCL2:IGH fusion not reported
#365 opened by asaki1986 - 5
ctat_genome_lib update gencode v44
#378 opened by kjass001 - 2
Signal received: SIGSEGV
#384 opened by Chien-Fan - 2
No predictions output
#383 opened by errcricket - 6
- 7
problems with star-fusion.preliminary
#380 opened by direnardak - 1
Millions of reads
#381 opened by diegomd90 - 5
Please build in prerequisite check
#379 opened by huanyaogao - 1
Issue when running fusioninspector
#377 opened by visbal-ki - 4
Issue running STAR (part of STAR-Fusion pipeline): "No such file or directory at No such file or directory at /fs/ess/PAS0854/Software/STAR-Fusion/STAR-Fusion-v1.6.0/PerlLib/Pipeliner.pm
#376 opened by nadia35 - 7
Error in running --denovo_reconstruct
#363 opened by YimingLiu000 - 3
Kickstarting from STAR alignments
#373 opened by harish0201 - 2
Can STAR-fusion be used with nanopore data?
#375 opened by Tommy0398 - 1
Can I analyze fusion using aligned.sortedbyCoord.out.bam file as an input file?
#374 opened by jdjdj0202 - 7
low memory usage
#372 opened by anoronh4 - 6
- 1
Compatibility of STAR-Fusion with STAR
#370 opened by katjur01 - 6
Error with FusionInspector validate
#369 opened by pirateyoho - 1
Is there a concept of VAF corresponding to dna-seq?
#367 opened by user-tq - 6
Request for simulated fusion transcripts sequences
#366 opened by acloop62hz - 1
conda install v1.12.0 has no result
#364 opened by qquuzhao - 3
- 6
Star-Fusion with Drosophila Genome
#361 opened by cellmem - 4
ultima genomics version of STAR-Fusion
#360 opened by williambrandler - 2
What is 'leftbreakdinuc' in star-fusion output?
#359 opened by EvaPang2022 - 10
More number of fusions detected when using star-fusion v1.11.1 compared to star-fusion 1.10.1
#347 opened by EvaPang2022 - 2
Does this software work with WES data?
#358 opened by jingydz - 3
- 3
EXITING: different motifs for the same junction
#357 opened by Coaxecva - 7
FISH detected fusion not detected by STAR-Fusion
#356 opened by asaki1986 - 8
- 4
Is there any way to transform the star-fusion tsv results into bedpe files?
#354 opened by KevinZhou-hub - 4
tmp files remain after run
#348 opened by hbeale - 1
Pipeline stuck in the perl steps
#352 opened by sxz-ivan - 8
- 1
- 1
Strange annotation of FUS-DDIT3 fusion using GRCh38_gencode_v37_CTAT_lib_Mar012021
#349 opened by dshafranskaya - 2
Non-Fatal Error in log, should I worry?
#346 opened by rLannes - 1
Only Preliminary Outputs in output file.
#344 opened by jaxLeeRugby - 1
Error, don't understand arguments: [--denovo_reconstruc] at /usr/local/src/STAR-Fusion/STAR-Fusion line 505
#343 opened by shanyn1 - 2
Can we allow paralogs?
#342 opened by EvaPang2022 - 2
New breakpoints introduced by Fusioninspector.
#341 opened by EvaPang2022 - 1
Error: No such file or directory at /usr/local/src/STAR-Fusion/PerlLib/Pipeliner.pm line 181.
#340 opened by boyoon0731 - 2
Error in building the ctat_lib.
#339 opened by lizhan96 - 1
- 1
No output in star predictions file
#337 opened by manjumoorthy95 - 2
STAR-Fusion failed to run different STAR junction file generated by STAR parameter '--chimOutType WithinBAM SoftClip Junctions'
#336 opened by chengzhongshan - 5
singularity error :FATAL: "STAR-Fusion": executable file not found in $PATH
#335 opened by ioz-cas-jhy